Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0675 ATGGAACCTTTGCACTTGCACCATCCACTTCCAAATCCAATTCCCACACATGTTTCTAAAAATTCAATCTTTATTCCATCACCATTATCCATAGTTTCAAATACAAGACCACCATTGTACTTGAACAACAACATTAACAACAACAACATTGTCAGTCACAAAACTTTGACTTTGAGAAGAGCAGGGTGGTTTCTTGGTCTTACAGATAATAACAACAAAAAGAAGATGAATTTGCCTGAAATAGTGAAAGTTGGTGACCCAGTTTTGCATGAGGCTGCTGAAGAAGTTGACCCAAATGAGATAAAGTCTGAGAGAGTTCAGAAGGTTATTGATGATATGGTTAGTGTTATGAGGAAAGCTCCTGGAGTTGGTCTTGCTGCTCCTCAGATTGGTGTTCCTTTGAGGATAATTGTTTTGGAAGATACAAAAGAATATATTAGTTATGCCCCAAAGGAAGAGATTAAAGCTCAAGATAGACGACCTTTTGATCTTTTGGTGATTCTGAATCCCAAGCTAGAGAAGAAGAGCAAGAGAACTGCACTATTTTTCGAAGGTTGCTTAAGTGTTGATGGATTTAGAGCAGTGGTGGAACGAAATCTTGATGTTGAGGTTACAGGTTTGGATCGAAATGGCGAGCCGATCAAAATAACTGCTTCTGGTTGGCAGGCCCGGATTTTACAACATGAGTGTGATCACCTGGATGGAACTGTATATGTTGATAGGATGTTACCTAGAACTTTCAGAACAGTAGAGAACCTGCTCCTGCCTCTAGCCCAAGGCTGCCCCAAACTCGGCCCTCGCTAA 804 0.4067 MEPLHLHHPLPNPIPTHVSKNSIFIPSPLSIVSNTRPPLYLNNNINNNNIVSHKTLTLRRAGWFLGLTDNNNKKKMNLPEIVKVGDPVLHEAAEEVDPNEIKSERVQKVIDDMVSVMRKAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVILNPKLEKKSKRTALFFEGCLSVDGFRAVVERNLDVEVTGLDRNGEPIKITASGWQARILQHECDHLDGTVYVDRMLPRTFRTVENLLLPLAQGCPKLGPR* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0675 267 Hamap Peptide deformylase [def]. 77 253 IPR023635 GO:0042586
Lan9g0675 267 SUPERFAMILY Peptide deformylase 73 250 IPR036821 -
Lan9g0675 267 PANTHER PEPTIDE DEFORMYLASE 33 267 IPR023635 GO:0042586
Lan9g0675 267 Pfam Polypeptide deformylase 80 244 IPR023635 GO:0042586
Lan9g0675 267 Gene3D Peptide deformylase 76 266 IPR036821 -
Lan9g0675 267 PRINTS Peptide deformylase signature 111 140 IPR023635 GO:0042586
Lan9g0675 267 PRINTS Peptide deformylase signature 184 195 IPR023635 GO:0042586
Lan9g0675 267 PRINTS Peptide deformylase signature 196 214 IPR023635 GO:0042586
Lan9g0675 267 PRINTS Peptide deformylase signature 215 244 IPR023635 GO:0042586
Lan9g0675 267 PANTHER PEPTIDE DEFORMYLASE 33 267 - -
Lan9g0675 267 TIGRFAM pept_deformyl: peptide deformylase 80 244 IPR023635 GO:0042586
Lan9g0675 267 CDD Pep_deformylase 81 238 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0675 Lan-Chr9 9941695 9947272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0675 K01462 - gmx:100784292 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0212 10 1334046 1336629 Lan9g0675 9 9941695 9947272 PCT
Lan9g0675 9 9941695 9947272 Lan10g0212 10 1334046 1336629 PCT