Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0212 ATGGAGGCTTTGTTGCAGCGATTATCATTGTTCCGTAAACGTGCGGTTCCAACATCACTCTTGTTCCTTCAAAACATAAACAACAACAACACTCTCTTTCTCCCTTCATCTTCATCTCCAACACGAATCATTCAATTCCCACTATGGAGCAACACCATCAGATATTTGAGTTCAACAGCGGAAAGAAGAAAAGAAGGAGGATGGTTTATCAAAAAGCCCCCCAACATTGTAAAAGCTGGAGAACCTGTTCTTCACGAATCTGCAAGGGAAGTACAACCCAATGAGATCAAAACAGAGAGAGTGCAGAATATCATTGATGATATGATCAGGGTCATGAGAAAAGCTCCTGGTGTTGGTCTTGCTGCGCCTCAGATTGGAATTCCATTAAAGATAATTGTTTTAGAAGATACAGAAGAATATATTAGTTATGATAAAGAGGAAGAGGTCAAAGCACAAGATAGAAAACCTTTTGATCTTTTGGTGATCTTGAATCCCAAGCTAAAGAAGAAGAGCAACAGGACTGCCCTATTTTTTGAAGGGTGTCTGAGCGTTGATGGATTTATGGCTGTAGTAGAGCGTCACCTTGATGTCGAGGTTGAAGGTCTTGATCGTTATGGTGAACCCATCAAAATAAACGCTTCAGGTTGGAAGGCCCGGATTTTACAACACGAGTGTGATCACCTGGATGGAACACTGTATGTTGATAGGATGTTACCTAGAACTTTCAGAACTTCAAAAAACATCGATATGCCTCTTGCACATGTGTGCCCCAAACTTGGCCCTCGCTGA 789 0.4157 MEALLQRLSLFRKRAVPTSLLFLQNINNNNTLFLPSSSSPTRIIQFPLWSNTIRYLSSTAERRKEGGWFIKKPPNIVKAGEPVLHESAREVQPNEIKTERVQNIIDDMIRVMRKAPGVGLAAPQIGIPLKIIVLEDTEEYISYDKEEEVKAQDRKPFDLLVILNPKLKKKSNRTALFFEGCLSVDGFMAVVERHLDVEVEGLDRYGEPIKINASGWKARILQHECDHLDGTLYVDRMLPRTFRTSKNIDMPLAHVCPKLGPR* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0212 262 Pfam Polypeptide deformylase 75 239 IPR023635 GO:0042586
Lan10g0212 262 TIGRFAM pept_deformyl: peptide deformylase 75 241 IPR023635 GO:0042586
Lan10g0212 262 Hamap Peptide deformylase [def]. 72 248 IPR023635 GO:0042586
Lan10g0212 262 Gene3D Peptide deformylase 74 260 IPR036821 -
Lan10g0212 262 CDD Pep_deformylase 76 233 IPR023635 GO:0042586
Lan10g0212 262 PRINTS Peptide deformylase signature 106 135 IPR023635 GO:0042586
Lan10g0212 262 PRINTS Peptide deformylase signature 179 190 IPR023635 GO:0042586
Lan10g0212 262 PRINTS Peptide deformylase signature 191 209 IPR023635 GO:0042586
Lan10g0212 262 PRINTS Peptide deformylase signature 210 239 IPR023635 GO:0042586
Lan10g0212 262 PANTHER PEPTIDE DEFORMYLASE 70 262 - -
Lan10g0212 262 SUPERFAMILY Peptide deformylase 73 243 IPR036821 -
Lan10g0212 262 PANTHER PEPTIDE DEFORMYLASE 70 262 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0212 Lan-Chr10 1334046 1336629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0212 K01462 - gmx:100784292 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0212 10 1334046 1336629 Lan9g0675 9 9941695 9947272 PCT
Lan9g0675 9 9941695 9947272 Lan10g0212 10 1334046 1336629 PCT