Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0633 ATGACTAAGGTTGAGTTTAGGGAATCTGGTCTAGTCGTGAAGAAGATGAAAAAAATAAATTTGGCTCCAGAAAATGTTGATTATTGTAAATCTGCAGATTACCAAGATAGACTTGGTGATTTACCAGATTGCCTTATACATCACATTTTGTCCTTTGTGGAAACAAAGGATGCAATTCGAACTTCTGTTTTATCAAAAAGGTGGAGGCATCTTTGGGCTTCAGTTACCTGCCTGAACTTTAGCAGCAAATCATTCGCTCGGCTGGTTGAATTCAAGAAATTTGTGCTGTGGGTCCTATCCCATCGCGATTCATCCCAGGTCAAAGTTCTTATTTACTCTCGCTTTGGGGTAGATTATGCAACAGATCAATATCTATTGAATAAGGTTATTGAATATGCAGCATCACATGGTGTTGAAGAAATCAGAATCAATCTTCGGGCAAAAACTTGTGGTAGTCCACCCGTTGAAATCCCTTTGGCTTTATTTGCTTGTCAATCCTTGAAAATGCTCGAGTTCAAAGATTGCCATCCTACAAATGTATCCTTCCCTTTTGGTTGCAAATCATTGGAAACATTGCATTTGGAACGTTTCTCAATGCATCCGGCTGCAGCTAACTTTTCAAATCCATTTGCAAGTTTAGCGGAACTTTTTGGTTTTACGACATTGACAACTTTGCACTTAAACAGCTTCAGTATGTGTTATACCGGGATTGACTCTCTAGATCCTTTTGGCAATTGCGTCAATTTGAAGACTTTGCACTTAAGCGAAATGTCCTTTCAGTCTGATCTGAACCCGAAGGATTTCGTGATATCTGCTCCCCAACTCAAGAACTTGAGTCTAATGTGCAACCGCTTCAAATGCAAGATTGTAGTTGCTTCACCACAGCTTACAAATTTCAGCTACTTATATTCTACACGTTGTTCCTTCCTTGAGTTTACTCTTCCTTCCATGGATGGCTTGACCATTGATATTCATGAACTACATGATCAGTTGGAAAAGTCTCCTCATAAGAAGAGGCGGGACACGTTACATGGCTTGGTCAACATGTTACGGGGACATCGCAATTCTGAAGCAGTTAAACTATCCTTCTGCACCGTTGCGGTTACCTGTGGGACTGCAGTCTCGTTAAAACCCGAATCTTTGTCTTTTAGTAAATTGAAATTATTGAATTTTGGAGTTGGATCGACATATAAAATCTTCATCAATAACCTTGACCATATTGCTGCCTACTTCCGCAATTGCTCTCAGCATGCAGACTTTGAGGTTGTGACTATTTAG 1278 0.3991 MTKVEFRESGLVVKKMKKINLAPENVDYCKSADYQDRLGDLPDCLIHHILSFVETKDAIRTSVLSKRWRHLWASVTCLNFSSKSFARLVEFKKFVLWVLSHRDSSQVKVLIYSRFGVDYATDQYLLNKVIEYAASHGVEEIRINLRAKTCGSPPVEIPLALFACQSLKMLEFKDCHPTNVSFPFGCKSLETLHLERFSMHPAAANFSNPFASLAELFGFTTLTTLHLNSFSMCYTGIDSLDPFGNCVNLKTLHLSEMSFQSDLNPKDFVISAPQLKNLSLMCNRFKCKIVVASPQLTNFSYLYSTRCSFLEFTLPSMDGLTIDIHELHDQLEKSPHKKRRDTLHGLVNMLRGHRNSEAVKLSFCTVAVTCGTAVSLKPESLSFSKLKLLNFGVGSTYKIFINNLDHIAAYFRNCSQHADFEVVTI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0633 425 SUPERFAMILY F-box domain 36 90 IPR036047 GO:0005515
Lan9g0633 425 PANTHER CYCLIN-LIKE F-BOX 24 425 - -
Lan9g0633 425 Gene3D Ribonuclease Inhibitor 130 327 IPR032675 -
Lan9g0633 425 Pfam F-box domain 40 74 IPR001810 GO:0005515
Lan9g0633 425 SMART fbox_2 41 81 IPR001810 GO:0005515
Lan9g0633 425 ProSiteProfiles F-box domain profile. 35 88 IPR001810 GO:0005515
Lan9g0633 425 Gene3D - 25 77 - -
Lan9g0633 425 SUPERFAMILY L domain-like 156 311 - -
Lan9g0633 425 PANTHER F-BOX PROTEIN-LIKE 24 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0633 Lan-Chr9 9337111 9363626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0633 36 205 EF-hand Containing Proteins AT5G41840 31.414 1.42e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0633 - - vun:114167379 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0633 9 9337111 9363626 Lan2g0398 2 4036630 4040978 LSH