Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0398 ATGAAGAAGATGAAAAAAAGAATTTTAGCTTCGCAAAACGTTGATTATTGTAAATCTGCTGATTGTCAAGATAGACTTGGTGATTTACCGGATTGCCTTATCCATCATATTTTGTCCTTTGTGGAAACAAAGGATGCAATTCGAACTTGTGTTTTATCAAAAAGGTGGAGGCATCTTTGGGCTTCAGTTCCCTGCCTGAACTTCACCAGCAAATCATTTGCTCGGCTGGTTGATTTCAGGAAATTTGTGCTGTGGGTCCTATCCCATCGCGATTCTTCCCAGGTCAAAGTTCTTATTTACTCTCGCTTCGGGGTAGATTATGCGACAGATCAATATCTATTGAATAGGGTTATTGAATATGCAGCAGTGCATGGTGTTAAAGAAATCAGAATCAATCTTCAGGCAAAAACTTTTGGCAGTCCACCGGTTGAAATCCCCTTGGCTCTATTTGCTTGCCGATCCTTGAAAATGCTTGAGTTTAAAGATTGTCATCCTACAAATCTGTCATCCCCTATAGGTTGCAAATCATTGGAAATATTGCATTTGGAACGATTCTCAATGCATCCTGCTGCGGCTGACTTTTCAAATCCATTTGCAAGTTTGGCAGAACTTTTTGGTTTTACAACATTGACAACTTTGCACCTAAGCAGCTTCAGTCTGTGTTACACAGGGATTGACTGTCTGGATCCTTTCAGAAATTGTGTCAATTTGAAGACTTTGCACTTAAGTGAAATGTCCTTTCAGTCAGATCTGAACCCTAGGGATTTCGTGATATCCGCTCCCCAACTAAAGAACTTGAGTCTAATGTGCAACCGCTTTAAATGCAAGATTATAGTCGCTGCACCGCAGCTTACCAATTTCAGCTACTTATATTCTACACCTTGCGCCTTTTTTGAGTTTGGTCTTCCTTCCTTGGATGGCTTGACCATTGATATTCATGAACCACATGATCAGTTGGAAAAGTCTCATCACAAGAAGAGGCAGGAGACGTTACATGGTTTGATCAATATGTTACGGGGACAATGTAATGCTGAAGCAGTGAAACTATCCTTCTGCACTGTTGCGGTTACCTGTGGGACTGCAATCTTGTTAAAACCAGAATGTTTGTCTTTTAGTAAATTAAAGTCATTGAATTTCGGGGTCGGATCAACATATAAAATCTTCATTAACAACCTTGACCATATAGCTGCCTACTTCCGCAATTGCTCTCAGCATGCAGACTTTGAGATAGTGACTATTTAG 1242 0.4026 MKKMKKRILASQNVDYCKSADCQDRLGDLPDCLIHHILSFVETKDAIRTCVLSKRWRHLWASVPCLNFTSKSFARLVDFRKFVLWVLSHRDSSQVKVLIYSRFGVDYATDQYLLNRVIEYAAVHGVKEIRINLQAKTFGSPPVEIPLALFACRSLKMLEFKDCHPTNLSSPIGCKSLEILHLERFSMHPAAADFSNPFASLAELFGFTTLTTLHLSSFSLCYTGIDCLDPFRNCVNLKTLHLSEMSFQSDLNPRDFVISAPQLKNLSLMCNRFKCKIIVAAPQLTNFSYLYSTPCAFFEFGLPSLDGLTIDIHEPHDQLEKSHHKKRQETLHGLINMLRGQCNAEAVKLSFCTVAVTCGTAILLKPECLSFSKLKSLNFGVGSTYKIFINNLDHIAAYFRNCSQHADFEIVTI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0398 413 Gene3D - 10 66 - -
Lan2g0398 413 SMART fbox_2 29 68 IPR001810 GO:0005515
Lan2g0398 413 Pfam F-box domain 28 63 IPR001810 GO:0005515
Lan2g0398 413 PANTHER CYCLIN-LIKE F-BOX 15 413 - -
Lan2g0398 413 PANTHER F-BOX PROTEIN-LIKE 15 413 - -
Lan2g0398 413 ProSiteProfiles F-box domain profile. 23 76 IPR001810 GO:0005515
Lan2g0398 413 SUPERFAMILY F-box domain 24 78 IPR036047 GO:0005515
Lan2g0398 413 SUPERFAMILY L domain-like 144 301 - -
Lan2g0398 413 Gene3D Ribonuclease Inhibitor 122 295 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0398 Lan-Chr2 4036630 4040978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0398 24 190 EF-hand Containing Proteins AT5G41840 30.319 2.80e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0398 - - vun:114167379 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0633 9 9337111 9363626 Lan2g0398 2 4036630 4040978 LSH