Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0547 ATGGAATCATCTCAACATATAATATCCATTGTGAAAGGAGAAGAAAATATTGCTCAAATGAAAAAGGAGAACAATAAAATACACCCCAGGGACAAGCAGAATGAGACAAGGAACATAATCCACAGTGTCAAAGTAGGGGTCTCCTTGGTTTTGGTTTCACTTATGTACCTCTTGAATCCTCTCTTTCATCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTATTGTCATATTTGAATTCTCACCAGGAGCCACATTGGGAAAGGGATTGAATCGTGGAATGGGAACTATAGTAGGAGGTGGACTAGGTTGCTTAGCAGCATTTTTTGCACACAACATTATTGGAGGAGTTGGTAACTCAGTTATCATTGGTATTTTTGTATATATCTGTGGAACAGTTGGTACATATTTTCGATTGTTACCGAAGGTGAAGCAAAGATACGAATATGGGGTGGTGACATTGATGCTGACATTCAACCTGGTAATGATGTATGGTGTACGTGCTAATGAGAAAGTGTGGGAAATAGCACGTCAACGTCTCTTATCAATTGTTATGGGTTTCATTGTTTGCATTTGTGTGAGCTTATTCATCTTTCCCTTATGGGCCAGCGATGAACTTCATCATTCCACAGTCTCTACATTCCACGACCTTGCTAACACAATTCAGGGTTGTTTGGAGGAAAATGGCATACTCGTTAGTGAAAATGAAAGTCAACTCATTGCAGGCTTCACTCTTTGCAACTCGGTTTTGAACTCCAAGTCAAAGGATGAGTTATTGGCAAATTCTGCAAGATGGGAACCATGGCATGGAAAATTTGGATTTTGCTACCCTTGGGAGAACTACTTAAAAATTGGAAATGTTCTTCGAGAACTAGCTACATTTGTTCTTGCTGTTGGACATTCCCTCCAATCTTCAAAACAGGATATGGCATCTTTGAGGCAGACACATTTAGAGCAATTTGAAACATGTGAAGCAATAGGGTCAAGGGTAGCATGGGCTTTGAGAGAACTAGGAGATAGCATGAAGCAAATGAAGAAATGTGAAGACAACAAGGGTAGTAGCATTTTGGCAAAGTTAAAAGAATGTAGAGAAGAGCTAAGCTTGGTGATTTCAACATCCAAGGTAGCAATACTTGAAAATGGACAAGTGTTAGCTATTTCAAGCTTAGTGTTCTTGCTCATGAAAGTGGTGGACAAGGTAGAGGAGTTGGTTAAAGAGGTGGAGGAACTTGGACAAATTGCTGCTTTTCCTACTAACATAACTATTCCACTTTCTTCTTAA 1287 0.3947 MESSQHIISIVKGEENIAQMKKENNKIHPRDKQNETRNIIHSVKVGVSLVLVSLMYLLNPLFHQVGENAMWAIMTVIVIFEFSPGATLGKGLNRGMGTIVGGGLGCLAAFFAHNIIGGVGNSVIIGIFVYICGTVGTYFRLLPKVKQRYEYGVVTLMLTFNLVMMYGVRANEKVWEIARQRLLSIVMGFIVCICVSLFIFPLWASDELHHSTVSTFHDLANTIQGCLEENGILVSENESQLIAGFTLCNSVLNSKSKDELLANSARWEPWHGKFGFCYPWENYLKIGNVLRELATFVLAVGHSLQSSKQDMASLRQTHLEQFETCEAIGSRVAWALRELGDSMKQMKKCEDNKGSSILAKLKECREELSLVISTSKVAILENGQVLAISSLVFLLMKVVDKVEELVKEVEELGQIAAFPTNITIPLSS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0547 428 Pfam Aluminium activated malate transporter 33 412 IPR020966 GO:0015743
Lan9g0547 428 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 8 419 - -
Lan9g0547 428 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 8 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0547 Lan-Chr9 8192108 8194366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0547 15 416 Miscellaneous Gene Families AT1G08440 33.985 1.77e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0547 - - gmx:100802201 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0683 8 8984420 8987103 Lan9g0547 9 8192108 8194366 LSH
Lan9g0547 9 8192108 8194366 Lan8g0683 8 8984420 8987103 PCT
Lan9g0547 9 8192108 8194366 Lan9g0547 9 8192108 8194366 PCT
Lan19g0354 19 4364869 4368082 Lan9g0547 9 8192108 8194366 PCT
Lan9g0547 9 8192108 8194366 Lan19g0354 19 4364869 4368082 PCT