Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0683 ATGGAATCAAGTAATGTGATATGTATTACCAATGGTGAAGATAATATTGATCATAGGGAGGGTAATAAAAGTTTCAATTTTTCATTTCCATCCATTATTTCATGTCTTAGAGAGAAAAAGATCCATTGTGTCACTTCTTATTTCAGTGATAATCAAATGAAAAATGAGCATGAAACTAAACAAATAATACATAGTATCAAAGTTGGAATCTCTCTAGTTTTGGTTTCACTTCTTTACTTGGTGGATCCTCTATATGAACAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTGGTTGTTATCTTTGAATTCTCTGCAGGAGCTACACTAGGCAAGGGTTTAAACCGTGGAATGGGAACTATATTAGGAGCTGGACTTGGTTGCTTAGCAGCAGTTTTAGCTCAAAACCTTGGTGCAGTTGGAAACAAAGTTATCATTGGTGCTTCTGTATTTATCTTTGGTACAATTGGGACATATTTTCGGTTGATTCCAAGCATAAAGAAAAGATATGATTATGGAGTGATGCTTTTCATCTTGACTTATAATCTGGTTGTGGTATCTGGTGTAAGGGCTGATCAGAAAGTGTGGGAAATTGCATGTGAACGTTTCTTAACAATATTAATGGGTTTCATCATATGTATTTGTGTGAGCTTGTTACTTTTTCCATTGTGGGCCAGTGATGAACTTCATCAATCTACTGTCTCAAGATTCCAAGACCTTGCAAATACAATTCAAGGTTGTTTGGAGGAATATATAAATATCGGTATTAAAGAGGAAAATAAGTCTGTTGCTAGCTTCGGTGTTTGCAAGTCGATGTTAAACTCCAAGTCGAAGGATGAGTTACTGGCAATTTACGCAAAATGGGAACCATGGCATGGAAAATTTGGATTTTGGTACCCTTGGGAGAAGTACCTAAAGATTGGAGAGGCTCTTCGAGAAATGGCTGCAATTATTCTTGCTCTTGGAGGTTCCATCGAAATTTCAACATCGCCCAAGGCATTTACATCTGTGAATCAAACAATCCAATTGAAACTATGTGAAGCAATTGGATCAGATGTTGTGTGGGTTCTGCGAGAACTTGGAGACAGCATGAAACAAATGAGGAAATGTGAAGCAGACACTCATATATCAGAAAAGTTGAAAGCAGCAAAAACAGAACTAAGCTTGGTGATTTCCATGTTCAACATATCAGCACATGAGAATATTGATGCACTAGCAGTTGCCAGCTTCATATTCTTACTAAAAGAGGTGGTGGATAAGGTAGAGGAATTGACCAAAGAGGTGGACCAAGTTGGAGATATAGCTCATTTTCGCACTTACTAG 1326 0.3741 MESSNVICITNGEDNIDHREGNKSFNFSFPSIISCLREKKIHCVTSYFSDNQMKNEHETKQIIHSIKVGISLVLVSLLYLVDPLYEQVGENAMWAIMTVVVIFEFSAGATLGKGLNRGMGTILGAGLGCLAAVLAQNLGAVGNKVIIGASVFIFGTIGTYFRLIPSIKKRYDYGVMLFILTYNLVVVSGVRADQKVWEIACERFLTILMGFIICICVSLLLFPLWASDELHQSTVSRFQDLANTIQGCLEEYINIGIKEENKSVASFGVCKSMLNSKSKDELLAIYAKWEPWHGKFGFWYPWEKYLKIGEALREMAAIILALGGSIEISTSPKAFTSVNQTIQLKLCEAIGSDVVWVLRELGDSMKQMRKCEADTHISEKLKAAKTELSLVISMFNISAHENIDALAVASFIFLLKEVVDKVEELTKEVDQVGDIAHFRTY* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0683 441 Pfam Aluminium activated malate transporter 57 392 IPR020966 GO:0015743
Lan8g0683 441 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 439 - -
Lan8g0683 441 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 3 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0683 Lan-Chr8 8984420 8987103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0683 56 392 Miscellaneous Gene Families AT5G46600 40.870 4.01e-88 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0683 - - gmx:100527892 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0683 8 8984420 8987103 Lan9g0547 9 8192108 8194366 LSH
Lan9g0547 9 8192108 8194366 Lan8g0683 8 8984420 8987103 PCT
Lan19g0354 19 4364869 4368082 Lan8g0683 8 8984420 8987103 PCT
Lan8g0683 8 8984420 8987103 Lan19g0354 19 4364869 4368082 PCT