Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0535 ATGATGTCTGGGCTGATTGAAGGGCTTCCTGACGCTGTTGCGATTAGGTGCCTTGCACGAGTTCCCTTCTACCTCCATCCGACGCTGGAGCTTGTCGCTCATTCATGGCGAGCAGCCGTTCATAGCACTGAGTTATTCAAAGCTCGGCAGGAGGTTGGTTCATCTGAGGATCTGTTATGCGTCTGTGCTTATGACCCAGAGAATTTATGGCAGCTGTATGACCCTCTTCGAGATCTTTGGATTACGCTGCCTGTTCTTCCCTCAAAGATCAGGCACCTTTCCCACTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTGTGATCGGTGGTGGAAGTGGAGGTGTTGATCCTTTGACTGGTGATCAAGATGGTTGTTTTGCAACAGATGAAGTCTGGTCATATGACCCTGTAGTTCGACAGTGGTCCCCTCGGGCATCAATGTGTGTTCCCCGTTCGATGTTTGCATGCTGTGTCTTGAATGGGAGAATTGTTGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGACCCTGAAAAGGATGTCTGGATTCCAATGCCTGATCTTCACCGAACTCATAATTCAGCTTGTTCAGGAGTCGTAATTGGGGGAAAGGTCCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGGCAAGGATGGAATGTCGAGGAATTTGAGTGGCTGCAAGGTCCCATGGCTGTTGTCCAGGGTGCGCTTTATGTGATGAGCCATGGATTAATCAAGCAAGACAAAGAAGTGAGGAAGGTAGTTGGTTCAGCATCCGAGTTCCGAAGGAGATTTGGGTTTGCAATGATTGGACTAGGTGATGAGTTATATGTGATTGGAGGCTTAATTGGCCCCGACAGAATGAGTGACATTCAGCCATTATCAGATGTTGATGTTCTCACACTTGGAAGTGAGAGGCCAACATGGCGCCGGTCAGCTCCGATGACTCGGTGTCGTGGTACTATTCTTGGTTGTACACTGCTGAGAATTTAG 1035 0.4821 MMSGLIEGLPDAVAIRCLARVPFYLHPTLELVAHSWRAAVHSTELFKARQEVGSSEDLLCVCAYDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSGGVDPLTGDQDGCFATDEVWSYDPVVRQWSPRASMCVPRSMFACCVLNGRIVVAGGFTSCRKSISQAEMYDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGQGWNVEEFEWLQGPMAVVQGALYVMSHGLIKQDKEVRKVVGSASEFRRRFGFAMIGLGDELYVIGGLIGPDRMSDIQPLSDVDVLTLGSERPTWRRSAPMTRCRGTILGCTLLRI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0535 344 Pfam Kelch motif 150 195 IPR006652 GO:0005515
Lan9g0535 344 Pfam Kelch motif 93 147 IPR006652 GO:0005515
Lan9g0535 344 Pfam Kelch motif 277 329 IPR006652 GO:0005515
Lan9g0535 344 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 344 - -
Lan9g0535 344 SMART kelc_smart 162 209 IPR006652 GO:0005515
Lan9g0535 344 SMART kelc_smart 289 343 IPR006652 GO:0005515
Lan9g0535 344 SMART kelc_smart 104 161 IPR006652 GO:0005515
Lan9g0535 344 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 3 344 - -
Lan9g0535 344 Gene3D - 59 342 IPR015915 GO:0005515
Lan9g0535 344 SUPERFAMILY Kelch motif 62 333 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0535 Lan-Chr9 8143734 8145086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0535 9 189 Miscellaneous Gene Families AT4G33900 30.526 7.53e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0535 - - gmx:100800954 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0535 9 8143734 8145086 Lan5g1267 5 26327935 26329203 LSH