Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1267 ATGTCTGAACTGATTGAAGGACTTCCTGATGCTGTTTCAATTAGGTGCCTTGCAAGGGTTCCTTTCTACCTCCACCCGAAGCTCGAACTTGTCTCTCATTCTTGGCGAGCAGCCATTCACAGTCCAGAGTTATTCAATGCTCGCCACGAGATTGGTTCATCACAGGATCTCTTATGTGTCTGTGCTTATGACCCAGAGAATTTGTGGCAGCTCTATGACCCTCTTCGAGATCTTTGGATTACACTCCCTGTTCTTCCCTCAAAGATCACCCACCTTGCCCACTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTATCATTGGTGGTGGAAGTGGAGGAGTTGATCCCTTGACTGGTGATCAAGATGGTTGTTTTGCAACAGATGAGGTCTGGTCATACGACCCTGTACTTCGACACTGGGCCACTCGGGCTTCAATGCTTGTTCCCCGCTCCATGTTTGCATGCTGTGTTTTGAATGGCAAAATTATTGTCGCTGGTGGCTTTACTACCTGCAGAAAATCAATCTCTCATGCAGAAATCTATGATCCTGACAATGATGTTTGGACTCCAATGCCCGATCTTCATCGCACTCATAATTCAGCTTGTTCAGGAGTAGTCATTGAGGGAAAGGTCCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGGCAAGGGTGGACCGTCGAGGAATTCGAGTGGCTCCAAGGTCCAATGGCAGTTGTCCAGGGTGCACTTTATGTCATAAGCCATGGATTAATCAAGCAGGACAAGGAAGTGAGGAAGGTACTTGATTCAGCATCCGAGTTTCGAAGGAGATTTGGGTTTGCAATGATTGGACTAGGTGATGAGCTATATGTGATTGGAGGCTTAATTGGCCCTGATAGAATGAGTGACATTCAGCCATTATCTGATGTTGATGTTCTCACACTTGGGAGTGAGAGACCAACTTGGCGTCGCGCTGCTTCAATGACAAGGTGTCAAGGTACTATTCTTGGTTGTACAGTGCTGAGAATTTAG 1032 0.4661 MSELIEGLPDAVSIRCLARVPFYLHPKLELVSHSWRAAIHSPELFNARHEIGSSQDLLCVCAYDPENLWQLYDPLRDLWITLPVLPSKITHLAHFGAVSTAGKLFIIGGGSGGVDPLTGDQDGCFATDEVWSYDPVLRHWATRASMLVPRSMFACCVLNGKIIVAGGFTTCRKSISHAEIYDPDNDVWTPMPDLHRTHNSACSGVVIEGKVHVLHKDMSTVQVLDNAGQGWTVEEFEWLQGPMAVVQGALYVISHGLIKQDKEVRKVLDSASEFRRRFGFAMIGLGDELYVIGGLIGPDRMSDIQPLSDVDVLTLGSERPTWRRAASMTRCQGTILGCTVLRI* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1267 343 SMART kelc_smart 288 342 IPR006652 GO:0005515
Lan5g1267 343 SMART kelc_smart 161 209 IPR006652 GO:0005515
Lan5g1267 343 SMART kelc_smart 103 160 IPR006652 GO:0005515
Lan5g1267 343 SUPERFAMILY Kelch motif 61 328 IPR015915 GO:0005515
Lan5g1267 343 Gene3D - 57 341 IPR015915 GO:0005515
Lan5g1267 343 Pfam Kelch motif 276 328 IPR006652 GO:0005515
Lan5g1267 343 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Lan5g1267 343 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Lan5g1267 343 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 343 - -
Lan5g1267 343 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1267 Lan-Chr5 26327935 26329203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1267 8 188 Miscellaneous Gene Families AT4G33900 31.053 1.32e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1267 - - gmx:100788983 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0535 9 8143734 8145086 Lan5g1267 5 26327935 26329203 LSH