Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0520 ATGGAAGCAAGATTTTTTGCACAGAACAAGAGTCAAATACTAACTTCAGCTCATTGGAATAAGGTGAACAAATATAAACCACAAAATCCTTTTATTGTTGCAGTGCTCACAAGGCCTTCTTCTTCTTCAGATGACATTGCAGGACAAACAAGAAAAATAAATGTCTACAAAGATAACTTCTTTGATCTCTTAGCCATAAACCATTTATCAAAAACTGTTCAAGCATCTACAGGATTCAGTAACAATAAGAGTGGTTATGAGAGCTTGACAGAGGCAGCTATAATGGCTTCACAGAAATTGAATCCTATTCAGCAAAGAGAGGTGGTCATTGAATCTCTTTACAAAGCTTTCCCAAGGCCAATACTTTCATTGATAAGGAAGGTGGTACCAGAATCTAAAATAGCAAGAGAATGTTTTGCTGCCTTCACCTCTCTCTTCTTTGTTTGGTTAGTTGGGCCATCTGAGGTGAGTAAAACCGTCAAAAGAGTAAGAGCTACTATCGGGTCAGTGCCTATAGAGTGA 522 0.3793 MEARFFAQNKSQILTSAHWNKVNKYKPQNPFIVAVLTRPSSSSDDIAGQTRKINVYKDNFFDLLAINHLSKTVQASTGFSNNKSGYESLTEAAIMASQKLNPIQQREVVIESLYKAFPRPILSLIRKVVPESKIARECFAAFTSLFFVWLVGPSEVSKTVKRVRATIGSVPIE* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0520 173 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 1 158 - -
Lan9g0520 173 PANTHER BETA-CAROTENE ISOMERASE D27 1 158 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0520 Lan-Chr9 8022240 8024279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0520 K17911 - gmx:100813404 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0520 9 8022240 8024279 Lan8g0701 8 9109563 9112717 PCT
Lan9g0520 9 8022240 8024279 Lan9g0522 9 8026747 8030423 PCT
Lan8g0701 8 9109563 9112717 Lan9g0520 9 8022240 8024279 PCT
Lan9g0522 9 8026747 8030423 Lan9g0520 9 8022240 8024279 PCT