Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0701 ATGGAGGCAAATATTTTAGCACAAAGCAGGATTCCAACACTATGTTTAGCTCAATGGAAACTCGGACGTAAATCGAAGCAACCATGTGTGGTTGGAGTTCTCACGAGGCCTGTAACAGGTGAAGCAGCAGAAACTAATGTTTACAAAGATAGCTGGTTTGATCATATAGCCATAAACCATTTATCAAAAAGTGTTCAAGCAGCAACAGGACTCAGTAACAGTAAGAGTGGATATGAGAGCTTGGTTGAAGCATCTACTATGGCTTCAAAGGAATTTAATCATATTCAACAACAACAAGTTGTTATTCAAGCACTTGACAGAGCTTTCCCTAGGCCAATACTTTTACTGATAAGGACACTGCTACCACAATCTAAATTTGCAAGGGAATATTTTGCCGTATTCACAACTTTGTTCTTTGCTTGGTTAGTCGGGCCCTCCGAGGTTAGAGAATCAGAGATCAATGGGAGAAGAGAAAAAAATGTAGTCCACATAAAAAAATGCAGGTTTTTAGAAGAGTCAAATTGTATAGGCATGTGTATTAATCTCTGCAAAATGCCATCTCAATCATTTGTAAAGGACTCTCTGGATTTTGAAGACATGAGTTGTGAGATGATATTTGGGCAGGATCCCCCAGAATCAAATGATGATCCAGCATTGAAGCAACCATGCTATAAACTATGCAAGGCAAAGAAAAATCATGCGACGAATTGCCTCAGTTAA 720 0.3889 MEANILAQSRIPTLCLAQWKLGRKSKQPCVVGVLTRPVTGEAAETNVYKDSWFDHIAINHLSKSVQAATGLSNSKSGYESLVEASTMASKEFNHIQQQQVVIQALDRAFPRPILLLIRTLLPQSKFAREYFAVFTTLFFAWLVGPSEVRESEINGRREKNVVHIKKCRFLEESNCIGMCINLCKMPSQSFVKDSLDFEDMSCEMIFGQDPPESNDDPALKQPCYKLCKAKKNHATNCLS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0701 239 Pfam Beta-carotene isomerase D27-like, C-terminal 141 214 IPR025114 GO:0005506
Lan8g0701 239 PANTHER BETA-CAROTENE ISOMERASE D27 40 235 IPR038938 -
Lan8g0701 239 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 40 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0701 Lan-Chr8 9109563 9112717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0701 K17911 - gmx:100782912 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0701 8 9109563 9112717 Lan9g0522 9 8026747 8030423 LSH
Lan9g0520 9 8022240 8024279 Lan8g0701 8 9109563 9112717 PCT
Lan8g0701 8 9109563 9112717 Lan9g0520 9 8022240 8024279 PCT