Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0514 ATGGCAACCATCTTCTCAACAACAACTTCATCTTTCATCCATGCAACTCTTCTTCAAAAGAGACCACTTGGTCTCTCATCATCTTCTGTTCTAGGGTTGCCAACAATGGCTAAGGTTGGAAAAGTGAAGTGTTCCATGGAGGAAAAGCCTGCTGTGAAAGAAAGCAACACAATCATGGGTATGAGTGCATCATTGATGGCAGCTGCATGTGCTGCAACAATGTCAAACCCAGCCATGGCTTTGGTTGATGAGAGACTTAGCACTGAAGGAACAGGACTTCCCTTTGGACTTAGCAACAACCTTCTAGGTTGGATCTTGTTTGGTGTCTTTGGTCTTATATGGACTTTCTACTTTGTCTATGCTTCTAATCTTGAAGAGGATGAAGAGTCTGGATTATCTCTCTAA 405 0.4272 MATIFSTTTSSFIHATLLQKRPLGLSSSSVLGLPTMAKVGKVKCSMEEKPAVKESNTIMGMSASLMAAACAATMSNPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYASNLEEDEESGLSL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0514 134 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 134 - -
Lan9g0514 134 Pfam Photosystem II reaction centre W protein (PsbW) 1 134 IPR009806 GO:0009507|GO:0009523|GO:0015979
Lan9g0514 134 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 134 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0514 Lan-Chr9 7958639 7960043 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0514 K02721 - cit:102629478 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0514 9 7958639 7960043 Lan4g1745 4 26110715 26111714 LSH
Lan9g0514 9 7958639 7960043 Lan9g0514 9 7958639 7960043 PCT
Lan9g0514 9 7958639 7960043 Lan4g1745 4 26110715 26111714 PCT
Lan4g1745 4 26110715 26111714 Lan9g0514 9 7958639 7960043 PCT