Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1745 ATGACAACCATATCCGCTACCATCCCAACCTCATCCATCACTCATGCAAGTCTTGTCCAAAAGAGACCTATTGGGGTCTCATACTCTCATATTCTTGGATTGCCATCAATGTCTACTGTGGGAAGAGTGAGTTGCTCAATGGAGGTAAAGCCATGTGTGGAAGAAAAGAGGTCAAAAATGGGGATAGGGGCATCAATGATAGCAGGTACCTTTGCAGCAACCATGTCAAGCCCAGCCATGGGTTTGGTTGATGAGAGACTCAGCACTGAAGGAACAGGGCTTCCATTTGGGCTCAGTAATAATCTTCTTGGTTGGATACTCTTTGGTGTATTTGGTCTTATATGGACTCTTTATTTTCTCTATGTTTCTGGTCTTGATGAGGATGAAGATTCTGGATTATCCCTTTGA 408 0.4363 MTTISATIPTSSITHASLVQKRPIGVSYSHILGLPSMSTVGRVSCSMEVKPCVEEKRSKMGIGASMIAGTFAATMSSPAMGLVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFLYVSGLDEDEDSGLSL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1745 135 Pfam Photosystem II reaction centre W protein (PsbW) 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
Lan4g1745 135 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 135 - -
Lan4g1745 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 135 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1745 Lan-Chr4 26110715 26111714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1745 K02721 - gmx:100306223 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1745 4 26110715 26111714 Lan4g1745 4 26110715 26111714 ECH
Lan9g0514 9 7958639 7960043 Lan4g1745 4 26110715 26111714 LSH
Lan9g0514 9 7958639 7960043 Lan4g1745 4 26110715 26111714 PCT
Lan4g1745 4 26110715 26111714 Lan9g0514 9 7958639 7960043 PCT