Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0477 ATGGGTTATACTCTCAGAAACCGTTACACCTTCCTCTCTCTTCTTCACCTCTTCACACTTTCCATTCCCTTTCTTCTTCTTCCATCAGCTTCAGACACAACTTCCTTAATATACAAAGGGTGTGCAGATCAGAAGCTTCCAGACCCTTCTAGAACTTTCTCTCACACCCTCAATTCCCTCTTCTCCTCCCTTCTCTCACAAGCTTCACTCAAAAACTTCGCCGCCGCCACTTCCGGCGACGGCGCCACCGTGACGGGGTTGTACCAATGCCGTGGTGACCTCAGTAACACTGATTGCTATAACTGTGTTAGGAAGGTTACTGACATGGTGGGAAAACTATGTGATGCTGACGTGGCAGCTGTGAGGGTCCAGCTCAGTGGCTGCTATCTGAGGTATGAGATGGTTGGGTTCAAGCAAGTTCCTCAAACACAGCTTCTATACAAGCTTTGTGGGTCCAAGAAAGTGAATAATGGTGTTGGATTTGATGAAAAGAGGGACACAGCTTTTGGCATGGTGGAAAATGGTGTGAAGAGTGGTAGCAACATGTTCTACACTGGAAGTTATGAATCCCTTTATGTGTTGGGACAATGTGAAGGTGACTTAGGAAATGATGATTGTGGTGATTGTGTTAGTAGTGCTGAGCAACAAGCTAAAACTTTGTGTGGTGACTCAATTTCTGCACAAGTTTATCTGCATGGTTGTTATATTAGCTATAGTTTTTACCCCAATAGAGTTCCTACCACTACAACTTCTTCTTCATCAGGATCAGAATCTGTAGGAGGGCATCAACATACAAACAGAACTGTAGCTCTTGCAGTTGGAGGTTTTGCAGCTCTTGGATTCTTGATTGTTTTTATGTTATTTCTCAAATCAGCTTTGAAGAAAAAAGGTGGTAAACATTGA 903 0.4363 MGYTLRNRYTFLSLLHLFTLSIPFLLLPSASDTTSLIYKGCADQKLPDPSRTFSHTLNSLFSSLLSQASLKNFAAATSGDGATVTGLYQCRGDLSNTDCYNCVRKVTDMVGKLCDADVAAVRVQLSGCYLRYEMVGFKQVPQTQLLYKLCGSKKVNNGVGFDEKRDTAFGMVENGVKSGSNMFYTGSYESLYVLGQCEGDLGNDDCGDCVSSAEQQAKTLCGDSISAQVYLHGCYISYSFYPNRVPTTTTSSSSGSESVGGHQHTNRTVALAVGGFAALGFLIVFMLFLKSALKKKGGKH* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0477 300 Pfam Salt stress response/antifungal 158 240 IPR002902 -
Lan9g0477 300 Pfam Salt stress response/antifungal 45 133 IPR002902 -
Lan9g0477 300 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Lan9g0477 300 Gene3D - 142 242 IPR038408 -
Lan9g0477 300 Gene3D - 32 137 IPR038408 -
Lan9g0477 300 ProSiteProfiles Gnk2-homologous domain profile. 143 243 IPR002902 -
Lan9g0477 300 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 297 - -
Lan9g0477 300 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 10 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0477 Lan-Chr9 7132987 7135735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0477 11 242 Receptor kinase-like Gene Family AT4G05200 24.219 7.32e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0477 - - adu:107491720 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0477 9 7132987 7135735 Lan20g1009 20 10848257 10849840 PCT
Lan20g1009 20 10848257 10849840 Lan9g0477 9 7132987 7135735 PCT