Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1009 ATGGGTATGAACATGATCACAAAACGTTACTCCCAACCCTTTCTTTTTCTCTTCATTCTTTATGCGCTCTTTCTACATCATATATCAAATGCAGACAACACAAACTTGATTTTCAAGGGTTGTTCAGAAGAGAAACTGCAAGACCCATTTGGCATATGCACCAGAAACCTCAAATCCCTCTTGGTTTCTCTGGTGTCACAATCTAGACAAAAGCCTTTCTACACAACAACCTCAGGAGAAAACAAAAACATGATCATGGGCTTGTACCAATGCAAAGGAGACCTATCAAATAGTTCTTGCTACAACTGCGTTAGCAAGATTGATGACATGTTAGACAAGCTTTGTGGCAAGGTGGTGGCTGCAAGGGTCCACCTTTGTGGCTGTTACCTGAGGTATGAGGTTGTTGGGTTCAAGCAGGTACCTGAGACTCACTTGCTTTACAAGGTTTGTGGGTCCGAGCAAGAGAGAGAAGATAATGATAATGGGTTTGTGGAGAAAAGGGATGTGGCTTTTGATATGATTGAAAGTGGTGTGAAGAATGGTGGGAAATTGTTTTACAGTGGGAGTTATAAGTCTCTTAATGTGTTAGGGCAATGTGAGGGTGATTTGGCTAGTGATGATTGTGGGGATTGTGTGAAAAGTGCTGAGGATCAAGCCAAAACTGAGTGTGGTGACTCACTTTCTGCACAGATTTATCTGAACAAGTGCTATGTCAGTTACAATTTTAAACCAAATGAAATGCCCAAAGAATCATCTTCTCCAGGAACAATGTTGCAACAACACACTCAGAAAACAATAGCTCTTGTAGTGGGAGGGTTTGCAGCTTTGGGTTTCTTTGCAGTTTGTGTGTTATTTCTAAAGTCAGTGTTGAAGAAAAAAGATGATATGTAA 891 0.4074 MGMNMITKRYSQPFLFLFILYALFLHHISNADNTNLIFKGCSEEKLQDPFGICTRNLKSLLVSLVSQSRQKPFYTTTSGENKNMIMGLYQCKGDLSNSSCYNCVSKIDDMLDKLCGKVVAARVHLCGCYLRYEVVGFKQVPETHLLYKVCGSEQEREDNDNGFVEKRDVAFDMIESGVKNGGKLFYSGSYKSLNVLGQCEGDLASDDCGDCVKSAEDQAKTECGDSLSAQIYLNKCYVSYNFKPNEMPKESSSPGTMLQQHTQKTIALVVGGFAALGFFAVCVLFLKSVLKKKDDM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1009 296 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 294 - -
Lan20g1009 296 ProSiteProfiles Gnk2-homologous domain profile. 144 245 IPR002902 -
Lan20g1009 296 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Lan20g1009 296 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 10 294 - -
Lan20g1009 296 Pfam Salt stress response/antifungal 54 133 IPR002902 -
Lan20g1009 296 Pfam Salt stress response/antifungal 161 241 IPR002902 -
Lan20g1009 296 Gene3D - 32 137 IPR038408 -
Lan20g1009 296 Gene3D - 142 244 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1009 Lan-Chr20 10848257 10849840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1009 69 242 Receptor kinase-like Gene Family AT4G28670 28.729 8.51e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1009 - - gmx:100795002 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0477 9 7132987 7135735 Lan20g1009 20 10848257 10849840 PCT
Lan20g1009 20 10848257 10849840 Lan9g0477 9 7132987 7135735 PCT