Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0469 ATGGAAGAAGCGTTGGAACTCACACGCGCCAAGGACGCGAAGGAACGAATGGCTGGTGTAGAACGTCTCCATCACCTTCTAGAAGCTTCTAGAAAGAGCCTCACTTCTTCTCAAGTAACTTCACTCATTCATTCCTCATTCGATTTGTTGAGCGATAACAACTTCAGAGTCTCTCAGGTCACGCTTCAATCCCTCGCTTCCGCCGCAGTTCTCTCCGGCGATCATTTCAAGCTCCATTTCAATGCTCTTCTTCCCGCCGTCGTTGAACGCCTCGGTGATGCTAAGCATCCGGTTCGTGATGCCGCTACAAGGCTATTGCTCACTCTTATGGAGGTTTCTTCTCCTACTATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACACAGAAGCTGGAGAGTCCGGGAGGAGTTCACACGAACTGTCACATCTGCAATTAATTTATTTGCATCTACCGAGCTCCCGCTTCAACGGGCTATCCTTCCTCCTATTTTGAATTTGCTGAATGATCCTAATCCCGATGTAAGGGAGGCAGCTATTTTGTGCATTGAGGAGATGTATGTGCAAGCTGGGCCTCAGTTTCGTGATGAACTTCAGCGCCACAATCTTCCATCATCTTTGGTGAAAGATATTAATGCCCGGCTAGAGGGAATTCAACCAAAAGTTCGCACTTTAGATGGTTTTCCAAGTGGTTATGTTACTGGGGAAATTAAGTCTTTGAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAATTCATCAAGGGAGACCTCTCTTTTTGGAGATGGTGATGTCACCGAAAAACCCATAGACTCCATCAAGGTATATTCTGAGAAGGAGTTAATCAGGGAAGTTGAGAAGATTGCGTCTACCCTTGTACCAGAAAAAGACTGGTCAATTCGTATTGCTACTATGCAGAGGATTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCATGTTTCCGTGGACTTCTGAAACAACTTATTGGACCATTAAGCACACAGTTGTCAGACCGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATCTACTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATGTGCTGAAATCTTTATTCCAGTCCTTTTCAAGCTGGTTGTCATTACTGTGCTTGTAATTGCAGAGTCTTCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAAATGACCGCAATGCAATACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTTCTGGAACATTGGCCTGATGCACCAGAAGTACATCGATCAGCTGATTTATATGAGGATATGATAAAGTGTTGTGTCAAAGACGCAATGAGTGAGGTACGATCTACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACATGGCCAGAGCGTTCTCGTCGCCTATTTTTGTCCTTTGACCCTGTTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATAGACGACACGCTTCACCTTCCATTCGTGATAGAGGTGCACCAATGTCATTACCCAGTCAAGCGTCTGCTTCATCTTATCTACCTGGTTATGGAACTTCTGCTATTGTCGCAATGCATAGAAGTTCAGGTTTATCATCAGGGTCATCTATCTCCTCCGGTGTACTTCTTTCACAAGCTAAGTCACTTGGAAATGGTACAGAAAGAAGTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCACCGCAATTGAAAGCATGCTTAAAGGCCAGGATCTGTCTGATAAGCACAATTCATCTCATCAGCCATCAAGTTTTGATCTAGGAATCGACCCTCCATCATCTCGTGATCCACCATTCCCCGCTGCTGTCCCCACATCTCGTAATCATTTGACAAGCTCTTTAAAAGCAGAATCAACTGCATCTGGTGTCAATAAAGGTAGTAAAAGAAATGGTGGTTTGGGTTTGTCTGACATAATTACTCAAATTCAAATTTCCAAAGATTCTGCCAAATTATCATATCATAGTAATGTTGGTAGTGAGCCTGTATCATATTCGAGTAAAAGGGGTCCTGAGAGATTACAAGAAAGAAGTTCTGTTGAGTACAACAGTGACATTAGGGAGGCTAGGACATTTATAAGCGCCAACACTGATAAACATTATCTTGATGGTCCTTATAGAGATGGAAACTTTAGGGACTCACATAATAGTTATGTCCCCAATTTCCAGAGGCCATTATCGAGAAAGAATGTATCTGGACGTATGTCTGCTGGCAGGAGGAGTTTTGACGATAACCAGCTGTCTCTTGCAGAGATGAGAAGTTATGTAGATGGACCACCATCTATTCATGAAGCTTTGAGTGAAGGACTTGCTTCAGGTTCTGACTGGTCTGCAAGGGTTGCTGCCTTCAATTATGTACACTCTTTGTTGCAGCAAGGCCCAAAGGGAATTCAAGAAGTTGTCCAGAATTTTGAGAAAGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACCCTAGCAGATATTGTTCCAGCATGCCGAAAGTCTTTTGAGGGTTACATGGAAAGAATATTACCCCATGTATTTTCTCGGTTAATTGACCCAAAAGAGCTTGTTAGGCAGCCATGCTCAACAACTTTGGAAGTTGTTAGCAAAACTTACAGTGTAGATTCTCTCTTACCTGCATTGTTACGCTCACTAGATGAACAAAGATCTCCAAAGGCTAAGTTAGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAGAATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAATTAATCCCATTGGTTCACGACAAAAATACAAAGATTAAAGAAACGGCGATTACATGCATTATATCAGTGTACTCTCACTTTGATTCAATTGCTGTTCTTAACTTTATTCTTAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCTCTTAAACAGTTCACTCCTCGTATTGAAGTAGACCTAATGAACTATCTGCAGAACAAGAAAGAGCGACAGCGTTCTAAGTCTTCCTATGATCAATCTGATGCTGTGGGAACATCCTCTGAAGATGGATATGTCGGTTTCTATAGGAAAGCTCAATACCTTGGAAGATATTCTGCAGGTTCTGTGGATAGTGATAGTGGCAGGAAGTGGAGTTCCCAAGATTCAACCCTGATTAAAGCCAGTCTTGACCAAGCAGCTTCTGGTGAAACTCAGGAACATTTGTATCAGAATATTGAGACTGATTCTAACAGTGGTTGTCTTGGTTCAAAAGCTAAAAATCTTGCTTATGCAGTCAATTCAATGGGTCAAAACTTTGGCTCTCAAACTAGCCAGCTTGGACATGTGGACAGTAGCATGAACTTTGAGGATCTTTCGACTCCTCGTATGGATGGTAATGGTTTGATGTCATTGGAGAATTTAAATGTGGCTGAAGGCTATGTAAATGATGAAGAACATCCGTCTGAATTGGAACATAATCATCGCTCAGACAAAGCTTTAAAGATTAACTCCTTGACAGACACACGGCCCAGCATTCCCCAAATTCTTCATGTGATATGCAGTGGGGTTGATGGAAGCCCTATTTCAAGTAAGAGGACTGCACTTGAACAGTTAGTTGAAGCTTCAATAACAAATGATAACTCTATTTGGACGAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTTTCTTTGATAGTTGAAATGCTTAAAAACCAGAAAGATGGCATGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTTCTTCATGTTACAAAAGAAAGTGTTGCTAAGGTCTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCACAGTACGATCCATTCAGATGTTTAAGTGTTATTGTGCCTCTACTGATCACTGAGGATGAGAATACTCTCGTCACTTGCATTAATTGCTTGACAAAGCTTATTGGCCAACTATCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTGCCTGCTCTGTTTGAAGCTTTCGGAAACCAGAGTGCAGATGTTCGCAAGAGTGTTGTTTTTTGTCTTGTGGATATCTACATCATGCTTGGGAAAGCATTCTTGCCATATTTACAAGGCCTTAACAACACACAATTGAAGTTAGTCACAATTTATGCCAACCGAATCTCACAAGCCAGGACAGGAAAAGTGATTGATGCCACTCAAGGTTAG 4323 0.4185 MEEALELTRAKDAKERMAGVERLHHLLEASRKSLTSSQVTSLIHSSFDLLSDNNFRVSQVTLQSLASAAVLSGDHFKLHFNALLPAVVERLGDAKHPVRDAATRLLLTLMEVSSPTIIVERAGSFAWAHRSWRVREEFTRTVTSAINLFASTELPLQRAILPPILNLLNDPNPDVREAAILCIEEMYVQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRTLDGFPSGYVTGEIKSLSVNPKKSSPKAKNSSRETSLFGDGDVTEKPIDSIKVYSEKELIREVEKIASTLVPEKDWSIRIATMQRIEGLVLGGAADYPCFRGLLKQLIGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEACAEIFIPVLFKLVVITVLVIAESSDNCIKTMLRNCKVARVLPRIADCAKNDRNAILRARCCEYALLVLEHWPDAPEVHRSADLYEDMIKCCVKDAMSEVRSTARMCYRMFAKTWPERSRRLFLSFDPVIQRLINEEDGGIHRRHASPSIRDRGAPMSLPSQASASSYLPGYGTSAIVAMHRSSGLSSGSSISSGVLLSQAKSLGNGTERSLESVLHASKQKVTAIESMLKGQDLSDKHNSSHQPSSFDLGIDPPSSRDPPFPAAVPTSRNHLTSSLKAESTASGVNKGSKRNGGLGLSDIITQIQISKDSAKLSYHSNVGSEPVSYSSKRGPERLQERSSVEYNSDIREARTFISANTDKHYLDGPYRDGNFRDSHNSYVPNFQRPLSRKNVSGRMSAGRRSFDDNQLSLAEMRSYVDGPPSIHEALSEGLASGSDWSARVAAFNYVHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKSFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKNAMNPEGAANIGILKLWLAKLIPLVHDKNTKIKETAITCIISVYSHFDSIAVLNFILSLSVEEQNSLRRALKQFTPRIEVDLMNYLQNKKERQRSKSSYDQSDAVGTSSEDGYVGFYRKAQYLGRYSAGSVDSDSGRKWSSQDSTLIKASLDQAASGETQEHLYQNIETDSNSGCLGSKAKNLAYAVNSMGQNFGSQTSQLGHVDSSMNFEDLSTPRMDGNGLMSLENLNVAEGYVNDEEHPSELEHNHRSDKALKINSLTDTRPSIPQILHVICSGVDGSPISSKRTALEQLVEASITNDNSIWTKYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDGMENSVEIVIEKLLHVTKESVAKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLITEDENTLVTCINCLTKLIGQLSQEELMAQLPSFLPALFEAFGNQSADVRKSVVFCLVDIYIMLGKAFLPYLQGLNNTQLKLVTIYANRISQARTGKVIDATQG* 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0469 1440 SUPERFAMILY ARM repeat 289 1430 IPR016024 -
Lan9g0469 1440 PANTHER CLASP 28 1432 - -
Lan9g0469 1440 MobiDBLite consensus disorder prediction 506 527 - -
Lan9g0469 1440 Pfam HEAT repeat 160 186 IPR000357 GO:0005515
Lan9g0469 1440 Coils Coil 1276 1296 - -
Lan9g0469 1440 MobiDBLite consensus disorder prediction 241 264 - -
Lan9g0469 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lan9g0469 1440 MobiDBLite consensus disorder prediction 241 261 - -
Lan9g0469 1440 Pfam CLASP N terminal 799 987 IPR024395 -
Lan9g0469 1440 Pfam CLASP N terminal 283 499 IPR024395 -
Lan9g0469 1440 MobiDBLite consensus disorder prediction 633 654 - -
Lan9g0469 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lan9g0469 1440 MobiDBLite consensus disorder prediction 682 706 - -
Lan9g0469 1440 SMART TOG_3 281 513 IPR034085 -
Lan9g0469 1440 SMART TOG_3 775 1023 IPR034085 -
Lan9g0469 1440 SMART TOG_3 3 224 IPR034085 -
Lan9g0469 1440 SMART TOG_3 1196 1432 IPR034085 -
Lan9g0469 1440 Gene3D - 791 1015 IPR011989 -
Lan9g0469 1440 MobiDBLite consensus disorder prediction 599 660 - -
Lan9g0469 1440 Gene3D - 266 505 IPR011989 -
Lan9g0469 1440 Gene3D - 1 221 IPR011989 -
Lan9g0469 1440 Gene3D - 1221 1431 IPR011989 -
Lan9g0469 1440 SUPERFAMILY ARM repeat 6 400 IPR016024 -
Lan9g0469 1440 PANTHER PROTEIN, PUTATIVE-RELATED 28 1432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0469 Lan-Chr9 6991296 7003893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0469 K16578 - gmx:100796697 2407.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0469 9 6991296 7003893 Lan5g1223 5 26080752 26097126 LSH