Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1223 ATGGAAGAAGCGTTGGAACTTGCACGCGCCAAGGACACGAAGGAACGAATGGCTGGAGTGGAACGTCTCCATCAACTTCTAGAAGCTTCTAGAAAGAGCCTCACATCTTCTGAAGTAACTTCTCTTGTTGATTCATGTTTAGATCTATTGAAGGATAACAACTTCCGAGTCTCACAAGGCGCGCTTCAGGCACTCGCTTCCGCCGCCGTTCTCTCCGGCGACCACTTCAAACTCCACTTCAACGCTCTAGTTCCCGCCGTCGTTGACCGATTAGGCGATTCAAAGCAACCTGTTCGTGACGCCGCCAGAAGACTCTTGCTCACTCTTATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGGGCAGGGTCCTTCGCTTGGGCACACAGAAGCTGGAGAGTCCGGGAGGAGTTCACACGAACTGTCACATCTGCAATTGATTTATTTGCATCTACTGAGCTCCCGCTTCAACGTGCTATCTTTCCTCCTGTTTTGCATTTGCTGAATGATCCTAATCCTTCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGTACAAGCTGGGCCTCAATTTCGTGATGAACTTCAACGCCACAACCTTCCTTCATCTTTGGTGAAAGATATTAATGCCCGGCTAGAGGGAATTCAACCAAAAGTTCGTGCTTCAGATGGTGTTCCAAGTGGTTATATTACTGGGGAAATTAAGCCTTTGACTGTTAATCCCAAAAAAAGTAGTCTAAAGGCTAAAAATTCAACAAGGGAGACCTCTCTTTTTGGAGGAGATGGTGATGTCACTGAGAAACCCTTAGACCCCATCAAGGTATATTCAGAGAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTACCCTTATACCAGAAAAAGACTGGTCAATTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGTGCTGCTGATTATCCATGTTTCCGTGGACTTCTGAAACAACTTATTGGACCGTTAAGCACACAATTGTCAGATCGAAGGTCTAGCATTGTCAAGCAGGCTTGCCATTTACTGTGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGTATGTGCTGAAATGTTTATTCCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTTCAGACAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGATTGTGCAAAAACTGATCGCAACGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACACCGGTCAGCTGATTTATATGAGGATATGATAAAGTGCTGTGTCAAAGATGCAATGAGTGAGGTGCGATCTACTGCAAGGATGTGCTACAGAATGTTTGCGAAAACTTGGCCAGAGCGTTCTCGACGCCTATTTCTGTCCTTTGATCCTGTTATTCAAAGGTTAATAAATGAAGAAGATGGAGGAATACATAGGCGACATGCTTCACCTTCCGTTCGTGATAGAGGTGGAACGATGTCATTACCCAGTCAAGCCGCTGCTCCATCTTATCTATCTAGTTATGGAACTTCAGCTATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCTGGGACATCTATCTCCTCCGGTGTACTTCTGTCGCAAGCTAAGTCACTTGGAAAGGGTACAGAACGAACTTTGGAAAGTGTTTTACATGCAAGCAAACAGAAGGTCTCTGCTATTGAAAGCATGCTTAGAGGTCTGGATTTGTCTGATAAACACAATTTATCTCAACGTCCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCGTCTCGTGATCCACCATTCCCCGCTGCTGTTCCTGCCTCTAATCATTTGACAAGCTCTTTAACAACAGAATCAACTGCGTCTGGTGTCAATAAGGGTAGTAAAAGAAATGGTGGTCTGGTTTTGTCTGACATAATTACTCAAATTCAAGCTTCCAAAGATTCTGCCAAGTTATCATATCATAGTAACGTTGGTATTGAGCCTTTATCATATTCGAGTAAAAGGGGTCCTGAGAGATTGCAAGAAAGAAGTTCTGTTGAGTACAACAGTGACATTAGGGAGGCTAGGAGATTTAAGAATCCCAATACTGATAAACATTATTTGGATGGTCCTGATAGAAATGGAAACTTTAGGGATTCACATAATAGTTATGTGCCCAATTTCCAGAGGCCACTGTCGAGAAAGAATGTATCTGGTCGTATGTCTGCTGGCAGAAGGAGTTTTGATGATAATCAGGTGTCTGTTGGAGAGATGGCAAGTCATGTAGATGGACCGACATCTCTTCAAGAAGCTTTGAGTGAAGGACTAAGTTCAGGTTCTGACTGGTCTGCAAGGGTTGCTGCCTTCAATTATCTGCATTCTTTGTTGCAGCAAGGTCCAAAGGGAATTCAAGAAGTTGTCCAGAATTTTGAGAAAGTAATGAAGTTGTTTTTTCAACACTTGGATGATCCTCACCATAAAGTTGCACAGGCTGCACTTTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCCCATGTATTTTCTCGGTTAATTGACCCAAAAGAGCTTGTTAGGCAGCCATGTTCAACAACTTTAGAAGTTGTTAGTAAAACTTACAGTGTAGATTCTCTCTTGCCTGCATTGTTACGTTCACTAGATGAACAAAGATCTCCAAAGGCTAAGTTGGCTGTTATTGAATTTGCTATCAATTCCTTTAACAAACATGCAGTGAATCCAGAAGGTGCTGCTAATATCGGCATCCTAAAATTATGGTTTGCTAAGTTAATCCCGTTTGTTCATGACAAAAATACAAAACTTAAAGAAGCGGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCAGTTGCAGTTCTTAACTTCATTCTCAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCTCTTAAACAGTATACTCCTCGTATTGAAGTAGACCTAATGAACTATCTGCAGAACAAGAAAGAGAGACAACGTTCTAAATCTTCATATGATCCATCTGATGTTGTGGGAACATCCTCCGAAGATGGATATGTTGGTTTCTCTAGGAAAACTCATTACCTTGGAAGATATTCTGCTGGTTCTGTAGATAGTGATAGTGGCAGGAAGTGGAGTTCCCAGGATTCAACCCTGATTAAGGCCAGTCTTGACCAAGCAGCTTCTGGTGAAACTCAGGAATATTTGTATCAGAATATTGAGACTGATTATAACAGTGGTAGTCTTGGTTTAAAAGCTAAAGATCTTCCTTATGCAGTCAATCCGATGGATCAAAACTTTGGCTCTCAGACTAACCAACTTGGACATATGGACCATAGCATGAACTTTGAGGGCCTTTCAACTCCTCGTCTGGATGTTAATGGTTTGATGTCATTGGAGAATTTAAATGTTGCTGAAGACTATGTACTTGACAAAGAACATCCTTCTGAATTGGAACTTAATCATCACTCAGCTGAAGCTCTAAAGGTTTACTCCTTGACAGACACAAGACCCAGTGTTCCCCAAATTCTTAATGTGATATGCAGTGGGGGTGATGGAAGCTCTATTTCAAGTAAGAGGACTGCTCTTGAACAGTTAGTTGAAGCTTCTACAACAAATGATCATTCTATTTGGATGAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGGGAACTTGCTCTTTCTTTGATAGTGGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAACTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATAATGCTGCTAAGGTCTCAAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCACAGTACGATCCATTCAGATGTTTAAGTGTTATTGTGCCTCTGCTGGTCACTGAGGATGAGAAAACTCTGGTGACTTGCATTAATTGCTTGACAAAGCTTGTGGGCCGGCTCTCTCAGGAGGAACTGATGGCTCAGCTACCCTCGTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAATCAGTGTGCAGATGTTCGCAAGACTGTTGTTTTCTGTCTTGTGGATATCTACATCATGCTTGGTAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACAATTTATGCCAATCGAATCTCACAAGCCAGGACAGGGAAAGCAATTGATGTCACTCATGATTAG 4323 0.4192 MEEALELARAKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDSCLDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALVPAVVDRLGDSKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHRSWRVREEFTRTVTSAIDLFASTELPLQRAIFPPVLHLLNDPNPSVREAAILCIEEMYVQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRASDGVPSGYITGEIKPLTVNPKKSSLKAKNSTRETSLFGGDGDVTEKPLDPIKVYSEKELIREIEKIASTLIPEKDWSIRIAAMQRIEGLVLGGAADYPCFRGLLKQLIGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEVCAEMFIPVLFKLVVITVLVIAESSDNCIKTMLRNCKVARVLPRIADCAKTDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVKDAMSEVRSTARMCYRMFAKTWPERSRRLFLSFDPVIQRLINEEDGGIHRRHASPSVRDRGGTMSLPSQAAAPSYLSSYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGKGTERTLESVLHASKQKVSAIESMLRGLDLSDKHNLSQRPSSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTTESTASGVNKGSKRNGGLVLSDIITQIQASKDSAKLSYHSNVGIEPLSYSSKRGPERLQERSSVEYNSDIREARRFKNPNTDKHYLDGPDRNGNFRDSHNSYVPNFQRPLSRKNVSGRMSAGRRSFDDNQVSVGEMASHVDGPTSLQEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAVNPEGAANIGILKLWFAKLIPFVHDKNTKLKEAAITCIISVYSHFDSVAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKTHYLGRYSAGSVDSDSGRKWSSQDSTLIKASLDQAASGETQEYLYQNIETDYNSGSLGLKAKDLPYAVNPMDQNFGSQTNQLGHMDHSMNFEGLSTPRLDVNGLMSLENLNVAEDYVLDKEHPSELELNHHSAEALKVYSLTDTRPSVPQILNVICSGGDGSSISSKRTALEQLVEASTTNDHSIWMKYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVIEKLLHVTKDNAAKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQCADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDVTHD* 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1223 1440 PANTHER CLASP 28 1432 - -
Lan5g1223 1440 MobiDBLite consensus disorder prediction 634 654 - -
Lan5g1223 1440 SUPERFAMILY ARM repeat 2 399 IPR016024 -
Lan5g1223 1440 Coils Coil 1276 1296 - -
Lan5g1223 1440 SMART TOG_3 3 224 IPR034085 -
Lan5g1223 1440 SMART TOG_3 1199 1432 IPR034085 -
Lan5g1223 1440 SMART TOG_3 778 1020 IPR034085 -
Lan5g1223 1440 SMART TOG_3 270 514 IPR034085 -
Lan5g1223 1440 Pfam CLASP N terminal 798 989 IPR024395 -
Lan5g1223 1440 Pfam CLASP N terminal 285 500 IPR024395 -
Lan5g1223 1440 SUPERFAMILY ARM repeat 289 1430 IPR016024 -
Lan5g1223 1440 Gene3D - 1 221 IPR011989 -
Lan5g1223 1440 Gene3D - 1221 1432 IPR011989 -
Lan5g1223 1440 Gene3D - 267 506 IPR011989 -
Lan5g1223 1440 MobiDBLite consensus disorder prediction 603 658 - -
Lan5g1223 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lan5g1223 1440 MobiDBLite consensus disorder prediction 719 737 - -
Lan5g1223 1440 MobiDBLite consensus disorder prediction 507 527 - -
Lan5g1223 1440 MobiDBLite consensus disorder prediction 719 751 - -
Lan5g1223 1440 Gene3D - 790 1015 IPR011989 -
Lan5g1223 1440 Pfam HEAT repeat 160 186 IPR000357 GO:0005515
Lan5g1223 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lan5g1223 1440 PANTHER PROTEIN, PUTATIVE-RELATED 28 1432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1223 Lan-Chr5 26080752 26097126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1223 K16578 - gmx:100796697 2468.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0469 9 6991296 7003893 Lan5g1223 5 26080752 26097126 LSH