Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0413 ATGGGGATTCTACAAGAGGATGTAGTGATTATAAGGCCACCAGAGAAAGATGGTGATAACACCGTCTTAACAGTTAATTGCCCCGACAAAACTGGTCTTGGTTGTGATTTGTGTCGGATCATACTCATATTTGGTGTTACCATTATCCGAGGAGATGTTACCGAGGTTCTATATGAGCTAGAGCTCAACATAAAGAAGGTGAAGGTATCTACTACACCCGATGGCAAAGTGGTGGATCTGTTTTTCATCACGGATACAAGGGAACTCCTACATACAAAACCGAGAAGGGATGACACAATCGAACAGTTAACGGCTATTTTGAAGGATGCCTTAATTACGATTGACATTGAATTAGTTGGCCCAGAGATTCCTTCATGTTCTCAATCATCTTCCTTCCTTCCAACTGCAATCACCGAAGATATCTTTGATTTAGAATTGCCTGATTCGGTTCGAACTGGGACTTTCACATCGGATTCTGTGTCTGTTGAGATGGACAATTCACTGAGTCCTGCTCACACACTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTATGATATACAGATTTCTTATGGACGCTTCACTACAAAACCTAGAGGAAAATGTGAGATCGACTTGTTCATCGTGCAAGCAGATGGGAAAAAGATAGTTGACTCCAGCAAGCAGAAGTCTTTGTCAGCACGCCTTAGGACGGAACTAATCCGTCCACTCAGAGTAGCTGTTGTGAGCAGGGGCCCTGATTCAGAACTGCTGGTTGCAAACCCTGTCGAGTTGTCCGGCAAGGGTCGGCCTCTGGTTTTTTATGACATCACTCTTGCTCTCAAAATGCTCGGCACCTGCATCTTTTCGGCTGAAATTGGAAGACATGTGATTGGAGACAGAGAATGGGAAGTTTATAGAATCTTGCTTGATGAAGGAGAAGGAGTGTCTATTCCAAGGAACAATATTGAGAAAGGAGTTTGGAAAATGTTGATGGGTTGGGAATAA 1020 0.4304 MGILQEDVVIIRPPEKDGDNTVLTVNCPDKTGLGCDLCRIILIFGVTIIRGDVTEVLYELELNIKKVKVSTTPDGKVVDLFFITDTRELLHTKPRRDDTIEQLTAILKDALITIDIELVGPEIPSCSQSSSFLPTAITEDIFDLELPDSVRTGTFTSDSVSVEMDNSLSPAHTLVQIMCQDHKGLLYDIMRTLKDYDIQISYGRFTTKPRGKCEIDLFIVQADGKKIVDSSKQKSLSARLRTELIRPLRVAVVSRGPDSELLVANPVELSGKGRPLVFYDITLALKMLGTCIFSAEIGRHVIGDREWEVYRILLDEGEGVSIPRNNIEKGVWKMLMGWE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0413 339 SUPERFAMILY ACT-like 171 228 IPR045865 -
Lan9g0413 339 ProSiteProfiles ACT domain profile. 174 255 IPR002912 -
Lan9g0413 339 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 52 339 IPR040217 -
Lan9g0413 339 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 53 IPR040217 -
Lan9g0413 339 SUPERFAMILY ACT-like 19 108 IPR045865 -
Lan9g0413 339 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 52 339 - -
Lan9g0413 339 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0413 Lan-Chr9 5976509 5980276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0413 - - gmx:100797226 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0413 9 5976509 5980276 Lan5g1149 5 24783961 24787410 LSH