Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1149 ATGGGGATATTGCATGATGATGTAGTGATTATAAGGCCACCAGAGAAAGAAGGTGACACCACCGTGTTAACAGTTAATTGCCCTGACAAAACTGGTCTTGGTTGTGATTTGTGTCGCATCATACTCTTCTTTGGTGTCACCATTCTCCGTGGAGATGTTTCAACTGATGGGAAATGGTGCTACTTGGTTTTCTGGGTGGTGGGGAAACCTAAAACAAGGTGGAGTTTGTTGAAGAAGAGGTTAATTGGGGCATGCCCTACTTGTTCTTCAGCTTCTGGAATTTCATATTACTGCACTGATTTGAATCCTCCAAAGCCTCCCAATGTTTTCCTTTTGAAGTTTTCTTGCCATGATCGGAGAGGACTTTTACATGATGTTACCGAGGTTCTTTGTGAGCTAGAGCTCACCATTAAGAAAGTGAAGGTATCTACTACACCTGATGGAAAAGTGGTGGATCTGTTTTTCATCACAGATACCAGGGAACTCCTACATACGAAGAAGAGAAAGGATGACACGATTGAACAGTTAACAACTATTTTGAAGGATGCCTTACTCACCATTGATATCGAATTGGTTGGCCCGGAAATTCCTGCTTGTTCTCAAGCATCTTCCTTCCTTCCACCTTCAATCACAGAAGATATCTTTGATTTGGATTTGCCTGATTCGGCTCGAAGTGGGACTTTCACATCAGATTCTGTTTCTGTTGTGATGGACAATTCACTGAGTCCTGCTCACACACTCATCCAAATTATGTGCCACGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTACAATATTCAGATTTCTTATGGACGCTTCACTTCAAAACCTAGACGAAAATGCGAGATTGACTTGTTCATCGTGCAAACAGATGGGAAAAAGATTGTCGACTCCAGCAAGCAGAAGTCTTTATCAGCACGCCTCAGGACGGAACTAATTCGTCCGCTCAGAGTAGCTGTCGTGAGCAGGGGCCCTGATTCAGAGCTGCTAGTTGCAAACCCTGTGGAGTTGTCCGGAAAAGGGCGGCCTCTTGTTTTTTATGACATCACTCTTGCTCTCAAAATGCTTGACACCGGCATCTTTTCGGCCGAAATTGGAAGACATGTAATTGGAGACAGAGAATGGGAAGTTTACAGAATCTTGCTTGATGAAGGGGAAGGATTATCTGTTCCAAGGAACAAGATTGAGAAAGGTGTTTGGAAAATGTTGATGGGTTGGGAATGA 1239 0.4326 MGILHDDVVIIRPPEKEGDTTVLTVNCPDKTGLGCDLCRIILFFGVTILRGDVSTDGKWCYLVFWVVGKPKTRWSLLKKRLIGACPTCSSASGISYYCTDLNPPKPPNVFLLKFSCHDRRGLLHDVTEVLCELELTIKKVKVSTTPDGKVVDLFFITDTRELLHTKKRKDDTIEQLTTILKDALLTIDIELVGPEIPACSQASSFLPPSITEDIFDLDLPDSARSGTFTSDSVSVVMDNSLSPAHTLIQIMCHDHKGLLYDIMRTLKDYNIQISYGRFTSKPRRKCEIDLFIVQTDGKKIVDSSKQKSLSARLRTELIRPLRVAVVSRGPDSELLVANPVELSGKGRPLVFYDITLALKMLDTGIFSAEIGRHVIGDREWEVYRILLDEGEGLSVPRNKIEKGVWKMLMGWE* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1149 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Lan5g1149 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Lan5g1149 412 Gene3D - 104 191 - -
Lan5g1149 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
Lan5g1149 412 SUPERFAMILY ACT-like 244 301 IPR045865 -
Lan5g1149 412 SUPERFAMILY ACT-like 18 81 IPR045865 -
Lan5g1149 412 SUPERFAMILY ACT-like 107 181 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1149 Lan-Chr5 24783961 24787410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1149 - - gmx:100797226 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1149 5 24783961 24787410 Lan5g1149 5 24783961 24787410 ECH
Lan9g0413 9 5976509 5980276 Lan5g1149 5 24783961 24787410 LSH