Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0410 ATGGCAGTAACATCAACCTCATCACTCTACATTGGTCTTCGTCGCCCTGTCCCAAAGCTTGAATCTTTTGATTCTCACTCTTTCTTTCATTCCAATCTTCGTTTCTCTCTTTCTCCTTCTCGTCCTGTTTTCGCCATGGCTGCTTCTCCCAAGTTCTTTGTTGGTGGAAACTGGAAATGTAACGGAACAAAAGACTCCATTAGTAAGCTTATCACTGAATTGAACAGTGCAAAATTGGAGCCTGATGTTGACGTTGTTGTTGCCCCTCCCTTCCTGTACATCGATCAGGTGAAAAGCTCAATTTCTGATCGTATCGAAATATCAGCCCAGAATTCCTGGGTAGGTAAAGGTGGTGCTTTCACAGGAGAAATCAGTGTGGAACAGCTGAAGGACGTTGGAGTTAAGTGGGTTATCCTGGGACATTCTGAGCGACGGCATATTATCGGAGAAAAAGACGAGTTCATAGGAAAGAAAGCTGCTTATGCTTTGAGTGAGGGTCTCGGAGTGATAGCATGCATTGGAGAACTATTACAAGAAAGGGAAGCTGGGAAGACTTTCGACGTTATTTTCCAGCAATTGAAGGCTTATGCAGATGCAGTGCCTAGTTGGGATAATGTTGTTATTGCATATGAACCTGTATGGGCCATCGGAACTGGCAAAGTGGCTTCACCTCAGCAAGCTCAGGAAGTGCATGTAGCTGTTCGTGATTGGCTTACAAAGAATGTCTCAGCTGAAGTTGCATCTAAAACCCGAATTATTTATGGAGGGTCTGTAAATGGAGGTAATAGTGCTGAGCTTGCAAAGGAAGTAGATATTGATGGATTTCTTGTTGGTGGTGCTTCATTAAAGGGTCCTGAGTTTGCAACCATTGTCAATTCAGTAACATCCAAGAAAATTGCAGCTTAA 906 0.4338 MAVTSTSSLYIGLRRPVPKLESFDSHSFFHSNLRFSLSPSRPVFAMAASPKFFVGGNWKCNGTKDSISKLITELNSAKLEPDVDVVVAPPFLYIDQVKSSISDRIEISAQNSWVGKGGAFTGEISVEQLKDVGVKWVILGHSERRHIIGEKDEFIGKKAAYALSEGLGVIACIGELLQEREAGKTFDVIFQQLKAYADAVPSWDNVVIAYEPVWAIGTGKVASPQQAQEVHVAVRDWLTKNVSAEVASKTRIIYGGSVNGGNSAELAKEVDIDGFLVGGASLKGPEFATIVNSVTSKKIAA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0410 301 TIGRFAM tim: triose-phosphate isomerase 53 283 IPR000652 GO:0004807
Lan9g0410 301 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 51 293 IPR000652 GO:0004807
Lan9g0410 301 ProSitePatterns Triosephosphate isomerase active site. 209 219 IPR020861 GO:0004807
Lan9g0410 301 Gene3D Aldolase class I 32 300 IPR013785 -
Lan9g0410 301 PANTHER TRIOSEPHOSPHATE ISOMERASE 6 299 IPR000652 GO:0004807
Lan9g0410 301 Pfam Triosephosphate isomerase 53 293 IPR000652 GO:0004807
Lan9g0410 301 CDD TIM 52 292 IPR000652 GO:0004807
Lan9g0410 301 SUPERFAMILY Triosephosphate isomerase (TIM) 46 294 IPR035990 GO:0004807
Lan9g0410 301 Hamap Triosephosphate isomerase [tpiA]. 50 293 IPR022896 GO:0004807|GO:0006096
Lan9g0410 301 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 6 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0410 Lan-Chr9 5938294 5942663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0410 K01803 - gmx:100819824 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0410 9 5938294 5942663 Lan19g0422 19 5627027 5631979 LSH