Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0406 ATGTCGGGCGCTGTGGCCGTAGTTGATGATTTGGATGGAGGAGTACTTTCTTGTGCAGAGAGAACACAATCTCTTGATGCCAATTCTAACATAGACCATTTATCTATATTGACAAATGGTGAAGCTGGCCATTCCTCTGAAATTGTTGGATTTAGGGTGGGAGAACTCTTGCTTTCTAATGGAGAGTCGTATTCCGGGTCCCTTCTTGGCGATATTCCTGAGGGCCAGGGTACGTATGTGTGGTCTGATGGAGGTGTATATGAGGGCGAGTGGAGACATGGAGCGAGGAATGGGATTGGAAAAATGCGATGGCGTTCTGGAGCAATGTATGAGGGTGAATTCTCTGGTGATTATATCCATGGTACGGGAACATATATTAGTTCGGATAAATTGACCTATAAAGGTCGGTGGCGATTGAATCTTAAGCATGGTCTTGGTTATCAAGTTTATCCTAATGGAGATATCTTTGAAGGGTCTTGGATACAAGGAACACCAGAGGGGCCTGGAAAGTATACCTGGGCGAACGGAAATGTATACTCGGGGAATATGAGAGGCGGGACAATGTCAGGAAAAGGAACACTCACCTGGATAACAGGGGACTCGTTTGAAGGAAGCTGGTTAAATGGCATGATGCATGGGTTAGGAGTGTATACTTGGAGTGATGGAGGCTGCTACGTCGGGACTTGGACACGCGGTCTAAAAGACGGAAAGGGAACCTTTTATCCGAGAGGCAACCGCCTTCCGACGGTGCAAGAGATTTACCTCAGTGCCTTGCGTAAAAGGGGGCTATTACCAGACTTGAGAAAGCAGAAGCAGGTGGGAGATGTCATGGTTGGTCAGAACCAGAGACCTCAGTCTAATGGAAGAAATGTTTCTCTGGAAAGACGTTGGAGTCTTGAGGTATCTATCGAGAAAGTGATTGGGCATGATTCAGCTTCCGATTTTACAGAATCTGTAACAGAAAGCGGAGATAAAGAGGTTAATGCCAAGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTAATAAGTGAGGTAGTGTTAGATAATATGTTTTCGTCAACGTCTAGAACGACAAGACGACTTCAAAGAAAACTCAAAGAGATAAAAAGACCTGGCGAAGCAATCATTAAAGGTCACCGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACCGTGGGCAAGATTACACCTGTACAGAGACGAGAAGTTAGAGCATCAGATTTTGGTGCTAAAGCAAGCTTTTGGATGGATTTTCCTAAAGAAGGATCTCAATTGACGCCTACTCATCAATCGGATGATTTTAAATGGAAAGACTACTGCCCGATGGTGTTCAGAAATTTAAGAGATATGTTCAAGATTGATGCCGCCGACTACATGATGTCCATTTGTGGAAATGATGCTCTGAGGGAACTATCTTCCCCTGGAAAAAGTGGCAGTGTCTTTTTCCTCTCTCAGGACGATCGTTTCATGATCAAGACACTGCGAAGATCTGAAGTGAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCACCATGTGAAGTCTTACGAAAATACGCTCATCACAAAGTTTTTCGGCCTGCACAGGATTATACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTTTGCACAGAATTAAGGATCCACCGGAGATTTGACTTAAAAGGTTCGTCCCTTGGACGGTCATCGGACAAGATAGAAATTGATGAGAACACCACTCTTAAAGATTTGGACCTGAACTACAGCTTCTACTTGGAACCATCTTGGCGGGAGTCTTTATTGAAGCAGATCGAAATAGACAGCAAGTTTTTGGAAGCACAACACATTATGGACTACAGCCTTCTTTTAGGTGTTCACTATCGAGCTCCCCAGCATCTACGTCGTATGTCATACAACCAAAGTACTAACGGCGATGGATTAGCAATTCTTGCAGAGGAAGACCCTCTGGAGGATGACGTATTGAACTATCCACAAGGCCTTGTTCTAGTTCCTCGAGGAGATGATAAGAGTGTTGTCGTAGGGCCTCATGTGAGGGGTAATCGGTTGCGAGCTTCATCTGCCGGTGATGAGGAGGTGGACCTACTTCTACCTGGTACAGCAAGCAGACTCCAAATTCAGCTCGGCGTGAACATGCCATCAAGGGCAGAGCTGCTTCCAGGAAAACAGGAAAAGCAAATGTTCCACGAAGTCTACGATGTCGTCCTGTACCTCGGTATCATCGACATATTGCAAGACTACAACATGACTAAGAGGATTGAGCATGCATATAAATCTCTTCAATTTGATTCATTGTCTATTTCCGCTGTGGATCCTACGTTCTACTCGCATCGCTTCCTGGAATTCATTCAGAAAGTGTTTCCGCCGAATGCAACGCCAGCTTAA 2415 0.4455 MSGAVAVVDDLDGGVLSCAERTQSLDANSNIDHLSILTNGEAGHSSEIVGFRVGELLLSNGESYSGSLLGDIPEGQGTYVWSDGGVYEGEWRHGARNGIGKMRWRSGAMYEGEFSGDYIHGTGTYISSDKLTYKGRWRLNLKHGLGYQVYPNGDIFEGSWIQGTPEGPGKYTWANGNVYSGNMRGGTMSGKGTLTWITGDSFEGSWLNGMMHGLGVYTWSDGGCYVGTWTRGLKDGKGTFYPRGNRLPTVQEIYLSALRKRGLLPDLRKQKQVGDVMVGQNQRPQSNGRNVSLERRWSLEVSIEKVIGHDSASDFTESVTESGDKEVNAKIPILEREYMQGVLISEVVLDNMFSSTSRTTRRLQRKLKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPVQRREVRASDFGAKASFWMDFPKEGSQLTPTHQSDDFKWKDYCPMVFRNLRDMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIIPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYSFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRRMSYNQSTNGDGLAILAEEDPLEDDVLNYPQGLVLVPRGDDKSVVVGPHVRGNRLRASSAGDEEVDLLLPGTASRLQIQLGVNMPSRAELLPGKQEKQMFHEVYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISAVDPTFYSHRFLEFIQKVFPPNATPA* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0406 804 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 173 244 - -
Lan9g0406 804 SMART PIPK_2 410 798 IPR002498 GO:0016307|GO:0046488
Lan9g0406 804 Gene3D - 66 119 - -
Lan9g0406 804 Gene3D - 162 207 - -
Lan9g0406 804 Gene3D - 208 250 - -
Lan9g0406 804 Gene3D - 120 161 - -
Lan9g0406 804 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 380 797 IPR002498 GO:0016307|GO:0046488
Lan9g0406 804 SUPERFAMILY SAICAR synthase-like 379 797 - -
Lan9g0406 804 SMART morn 177 198 IPR003409 -
Lan9g0406 804 SMART morn 108 129 IPR003409 -
Lan9g0406 804 SMART morn 154 175 IPR003409 -
Lan9g0406 804 SMART morn 85 106 IPR003409 -
Lan9g0406 804 SMART morn 131 152 IPR003409 -
Lan9g0406 804 SMART morn 62 83 IPR003409 -
Lan9g0406 804 SMART morn 223 244 IPR003409 -
Lan9g0406 804 SMART morn 200 221 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 225 246 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 156 178 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 110 129 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 64 86 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 202 223 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 179 200 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 87 108 IPR003409 -
Lan9g0406 804 Pfam MORN repeat 133 154 IPR003409 -
Lan9g0406 804 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 283 800 - -
Lan9g0406 804 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 19 276 - -
Lan9g0406 804 CDD PIPKc_AtPIP5K_like 383 796 - -
Lan9g0406 804 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 186 - -
Lan9g0406 804 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 276 IPR023610 -
Lan9g0406 804 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 283 800 IPR023610 -
Lan9g0406 804 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 369 551 IPR027484 -
Lan9g0406 804 PIRSF PIP5K_plant 9 801 IPR017163 GO:0005524|GO:0016308
Lan9g0406 804 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 469 795 IPR002498 GO:0016307|GO:0046488
Lan9g0406 804 Gene3D - 552 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0406 Lan-Chr9 5900811 5907493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0406 14 800 Acyl Lipid Metabolism Gene Families AT3G09920 74.257 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0406 K00889 - gmx:100800418 1361.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0406 9 5900811 5907493 Lan5g1145 5 24757828 24765612 LSH
Lan9g0406 9 5900811 5907493 Lan11g1444 11 23646197 23660794 PCT
Lan11g1444 11 23646197 23660794 Lan9g0406 9 5900811 5907493 PCT