Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1145 ATGTCTGGCACTGTGACCATAGTTGATAATTTCGATGGAGGGGCACTTTCTTCTGCAGAGAGAACACAATCTCTTGATGCCAATTGTAATATAGACCACTTATCTATATTGACTAATGGTGAAGCCGATCATTCCTCTGAAATTGTCGGCTTTAGGGTCGGAGAGCTCTTACTTTCTAATGGAGAGTCATATTCCGGGTCCCTTCTTGGCAATATTCCTGAAGGCCAGGGTACGTATGTGTGGTCTGACGGAGGTGTATATGAAGGTGAGTGGAGACGGGGGGAGAGAAATGGGATCGGAAAAATGCGATGGCATTCTGGAGCAATGTATGAGGGTGAATTCTCTGGTGGTTATATCCATGGTACGGGAACATATATTGGCTCAGATAAAACCTATAAAGGTCGGTGGCGATTGAATCTTAAACATGGTCTTGGTTATCAAGTTTATCGCAATGGTGATAACTTTGAAGGTTCTTGGATACAAGGAACACCAGAGGGGCCTGGAAAGTATACCTGGGCCAATGGGAATGTATACTTGGGGAATATGAGAGGTGGGACAATGTCGGGAAAAGGAACTCTCACATGGATAACGGGGGACTCGTTTGAAGGAAGCTGGTTAAATGGCACGATGCATGGCTTAGGAGTGTATACTTGGAGTGATGGAGGCTGCTACGTTGGGACTTGGACGGCTGGTCTAAAAGACGGAAAAGGAACCTTTTATCCACGAGGTAACCGCCTTCCAACCGTGCAAGAAATTTACCTCAGTGCCTTGCGTAAAAGGGGGCTATTGCCAGACTTGAGAAAGCAGAAACAGGTGGGAGATGTCATAATTGGTCAGAGCCAGGGGCCTCCTCAGTCTAATAGAAGAAATGTTTCTCTCGAAAGGCGTTGGAGTCTTGAGGTATCTATTGAGAAAGTGATCGGGCATGATTCAGCATTCGGTTTAACAGAACCTGGACCTGAAAACGGAGATAAAGAGGTTAATTCAAAGATCCCAATTTTGGAACGAGAGTACATGCAAGGTGTATTAATAAGTGAGCTAGTGTTAGATAATATGTTTTCATCAACTTCTAGAACGGCAAGACGACTTCAAAGAAAACTGAAAGAGATAAAAAGACCTGGAGAAGCAATCATTAAAGGTCATCGGAGTTATGATCTGATGCTCAGTTTGCAGCTTGGAATAAGGTATACTGTGGGCAAGATTACACCTGTACAGGGACGAGAAGTTCGAACATCAGATTTTGGTGCAAAAGCAAGCTTTTGGATGGATTTTCCCAAAGAAGGATCTCAATTGACACCTACTCATCAATCAGAGGATTTTAAATGGAAAGACTACTGCCCAATGGTGTTCAGAAATTTAAGAGATATGTTCAAGATTGATGCTGCTGACTACATGATGTCCATTTGTGGAAATGATGCTCTAAGGGAACTGTCTTCCCCAGGGAAAAGTGGCAGTGTCTTTTTCCTGTCTCAGGATGATCGTTTCATGATCAAGACACTGCGAAGATCTGAAGTCAAGGTTCTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCTTATGAAAATACACTCATCACAAAGTTTTTTGGCCTGCACAGGATTAAACCTTCAAGTGGTCAAAAGTTTCGCTTTGTTGTAATGGGAAATATGTTCTGCACAGAATTAAGGATCCATCGCAGATTTGATTTAAAAGGTTCGTCCCTTGGACGGTCATCAGACAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTAAACTACAGCTTCTACTTGGAACCATCTTGGCGGGAGTCTTTATTAAAGCAGATTGAAATAGACAGCAAGTTTTTGGAAGCACAGCACATCATGGATTACAGCCTTCTTCTAGGTGTTCATTATCGAGCTCCCCAGCATCTACGTCCTCTCACGTCATACAACCATCGAATAAATGGGGATGGATTACCGATTCTTGCCGAGGAAGACCCTCTGGAGGATGAAGTACTGAACTATCCACAAGGCCTTGTTCTGGTTCCTCGAGGAGGAGATGATGATAATAGTGTTGTTCTCGGACCTCATGTGAGGGGTAGTCGGTTGCGAGCTTCATCTGCTGGCGATGAGGAGGTGGATCTACTTCTACCTGGTACAGCAAGACTCCAAATTCAGCTCGGTGTGAACATGCCGTCGAGGGCAGAGCTGATTCCAGGTAAACAGGAAAAGGAAATGTTGCATGAGGTGTACGACGTCGTACTGTACCTAGGTATCATCGACATATTGCAAGACTACAACATGACTAAGAGGATTGAGCATGCATATAAATCTCTTCAGTTTGATTCTTTGTCTATCTCCGTTGTAGACCCGACATTCTACTCACATCGATTCCTGGAATTTATTCAGAAAGTGTTTCCACCAAATGCAACTTCAGGTTAA 2421 0.4337 MSGTVTIVDNFDGGALSSAERTQSLDANCNIDHLSILTNGEADHSSEIVGFRVGELLLSNGESYSGSLLGNIPEGQGTYVWSDGGVYEGEWRRGERNGIGKMRWHSGAMYEGEFSGGYIHGTGTYIGSDKTYKGRWRLNLKHGLGYQVYRNGDNFEGSWIQGTPEGPGKYTWANGNVYLGNMRGGTMSGKGTLTWITGDSFEGSWLNGTMHGLGVYTWSDGGCYVGTWTAGLKDGKGTFYPRGNRLPTVQEIYLSALRKRGLLPDLRKQKQVGDVIIGQSQGPPQSNRRNVSLERRWSLEVSIEKVIGHDSAFGLTEPGPENGDKEVNSKIPILEREYMQGVLISELVLDNMFSSTSRTARRLQRKLKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPVQGREVRTSDFGAKASFWMDFPKEGSQLTPTHQSEDFKWKDYCPMVFRNLRDMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRRSEVKVLLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSSDKIEIDENTTLKDLDLNYSFYLEPSWRESLLKQIEIDSKFLEAQHIMDYSLLLGVHYRAPQHLRPLTSYNHRINGDGLPILAEEDPLEDEVLNYPQGLVLVPRGGDDDNSVVLGPHVRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPSRAELIPGKQEKEMLHEVYDVVLYLGIIDILQDYNMTKRIEHAYKSLQFDSLSISVVDPTFYSHRFLEFIQKVFPPNATSG* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1145 806 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 469 797 IPR002498 GO:0016307|GO:0046488
Lan5g1145 806 SMART PIPK_2 410 800 IPR002498 GO:0016307|GO:0046488
Lan5g1145 806 Gene3D - 207 249 - -
Lan5g1145 806 Gene3D - 93 140 - -
Lan5g1145 806 Gene3D - 157 206 - -
Lan5g1145 806 Gene3D - 53 92 - -
Lan5g1145 806 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 380 799 IPR002498 GO:0016307|GO:0046488
Lan5g1145 806 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 275 IPR023610 -
Lan5g1145 806 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 285 802 IPR023610 -
Lan5g1145 806 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 19 275 - -
Lan5g1145 806 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 285 802 - -
Lan5g1145 806 SMART morn 108 129 IPR003409 -
Lan5g1145 806 SMART morn 85 106 IPR003409 -
Lan5g1145 806 SMART morn 199 220 IPR003409 -
Lan5g1145 806 SMART morn 222 243 IPR003409 -
Lan5g1145 806 SMART morn 130 151 IPR003409 -
Lan5g1145 806 SMART morn 176 197 IPR003409 -
Lan5g1145 806 SMART morn 153 174 IPR003409 -
Lan5g1145 806 SMART morn 62 83 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 87 108 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 178 199 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 64 86 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 224 245 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 201 222 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 132 153 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 155 177 IPR003409 -
Lan5g1145 806 Pfam MORN repeat 110 129 IPR003409 -
Lan5g1145 806 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 369 551 IPR027484 -
Lan5g1145 806 PIRSF PIP5K_plant 5 803 IPR017163 GO:0005524|GO:0016308
Lan5g1145 806 SUPERFAMILY SAICAR synthase-like 379 799 - -
Lan5g1145 806 CDD PIPKc_AtPIP5K_like 383 798 - -
Lan5g1145 806 Gene3D - 552 799 - -
Lan5g1145 806 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1145 Lan-Chr5 24757828 24765612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1145 14 805 Acyl Lipid Metabolism Gene Families AT3G09920 73.490 0.0 1213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1145 K00889 - gmx:100800418 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1145 5 24757828 24765612 Lan5g1145 5 24757828 24765612 ECH
Lan9g0406 9 5900811 5907493 Lan5g1145 5 24757828 24765612 LSH
Lan5g1145 5 24757828 24765612 Lan11g1444 11 23646197 23660794 PCT
Lan11g1444 11 23646197 23660794 Lan5g1145 5 24757828 24765612 PCT