Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0403 ATGGCTTCTTCCAAAACAATGCAACTTCACTTCCTTCTTGTTCCCTTAATGTCCCAAAGCCATCTCATACCCTTCACACATATGGCTAAGTTACTTGCATCCCAAGGCACATCCATTACCATTGTCCTTACACCTCTTAATGCATCAAGGTTCAACAACTTCATTGATGAAGCAAAAGCCTCAAACCTCAAAATCAAGTTTCACTTAATACCCTTTCCTTGTTTTCAAGCAGGGTTACCAGAAGGGTGTGAAAATATAGATACACTTCCATCATTTGAATACCAACCAAGGTTTTTTCATGCTAGTAACATGCTTCAAGACCCACTTGAGAAATGGTTATCACAAATTGAAACACTACCTAGTTGCATTATTTCTGATATATGTCTTCCTTGGACAGCAAGTATTGCATCAAAGTTCAATATTCCAAGGGTTATATTCCATATAATATCTTGTTTCACCCTCTTATGTTCACATAATATTGCAATATCTAAGGTTCATGAGAGTGTTACATCAATGACCAAGACTTTTGTTGTGCCTGATTTGCCTCATAGAATTGAATTCACCAAATCACAGTTACCTGAAGCAATGAGATCACAAGATTCAAAGGGTTGGGAAGATACTATTGATCAATTCAAAGCATCTGAAATTTTAGCACAAGGGATATTGATTAATAGTTTTGAAGAGTTAGAAATGTTATATGTAAAAGGGTATGAGAAAGTGGTTAAAAAAGTTTGGTGCATAGGACCACTTTCCTTGCATGATAATAAGGCCTCTATATATGATGATGAGTCTGAATGCTTCAATTTTCTTGCAACAAAGAAGCCTTGTTCTGTGATCTATGCGTGTTTCGGCAGCTTATCGCGCCTTTCGGTTTCACAATCGAAGGAGCTTGCTTTGGGCTTGGAAGCATCAAACCATGCATTTATTTGGGTGATTGGAAAGAAAGATTTTTCTGAAGAGTTAGAAAAATGGCTAGTTGATGAGAAATATGAAGATAGGAACAAAGAAAAAGGTATAATAATTAGAGGATGGGCACCACAAGTTAAGATACTATCTCATCCTAATATTGGTGCATTCTTAACTCATTGTGGTTGGAATTCAACACTTGAAGCTGTTGCTGCTGGTGTACCAATGATAACTTGGCCTATGTTTGCTGAACAATTCTATAATGAGAAGTTCATTGTGCATGTTTTGAACATTGGTGTGAGGGTTGGTGTTGAAGTTGTTGTTGATAACATGGAGGGAGAGAAAGTGTTGGTGAAGAAAGAGGATGTGAAGAATTCTATTGAGAATGTTATGGAACAAGGTGGAGAAGGGGAACATAGAAGGAAGAGGGCTAAAGAGCTAAAAGAAATGGCTCATAAGGCAGTTCAAGAAGGTGGATCTTCCAATACTAATTGTAAATTGTTCATTCACCAAATTATGGGTCAAATTCATAATTAA 1443 0.3687 MASSKTMQLHFLLVPLMSQSHLIPFTHMAKLLASQGTSITIVLTPLNASRFNNFIDEAKASNLKIKFHLIPFPCFQAGLPEGCENIDTLPSFEYQPRFFHASNMLQDPLEKWLSQIETLPSCIISDICLPWTASIASKFNIPRVIFHIISCFTLLCSHNIAISKVHESVTSMTKTFVVPDLPHRIEFTKSQLPEAMRSQDSKGWEDTIDQFKASEILAQGILINSFEELEMLYVKGYEKVVKKVWCIGPLSLHDNKASIYDDESECFNFLATKKPCSVIYACFGSLSRLSVSQSKELALGLEASNHAFIWVIGKKDFSEELEKWLVDEKYEDRNKEKGIIIRGWAPQVKILSHPNIGAFLTHCGWNSTLEAVAAGVPMITWPMFAEQFYNEKFIVHVLNIGVRVGVEVVVDNMEGEKVLVKKEDVKNSIENVMEQGGEGEHRRKRAKELKEMAHKAVQEGGSSNTNCKLFIHQIMGQIHN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0403 480 Gene3D Glycogen Phosphorylase B; 2 267 - -
Lan9g0403 480 CDD GT1_Gtf-like 9 453 IPR002213 GO:0008194
Lan9g0403 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 277 426 IPR002213 GO:0008194
Lan9g0403 480 PANTHER GLYCOSYLTRANSFERASE 5 477 - -
Lan9g0403 480 Gene3D Glycogen Phosphorylase B; 268 458 - -
Lan9g0403 480 PANTHER GLYCOSYLTRANSFERASE 5 477 - -
Lan9g0403 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 475 - -
Lan9g0403 480 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0403 Lan-Chr9 5870390 5872324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0403 1 475 Glycosyltransferase AT2G36780 47.059 2.36e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0403 K13496 - gmx:100777956 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0403 9 5870390 5872324 Lan5g1143 5 24741897 24743639 LSH