Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1143 ATGGTTTCTGAAACAAACATTCCTCACTTCACCCTTTTTCCTCTAATGGCACAAGGCCACATCATTCCCATGATGGACATTGCAAGACTCTTATCACAACATGGAGTTAAAGTTACCATTTTCACTACACCAAAAAATGCTTCTCGTTTTACCTCAGTTATCTCTAGAGCTGTTTCTTCAGGCCTTCAAATCCAACTACTTTTACTTCAATTTCCATCAAAAGAAGTAGGTTTACCTGAAGGGTGTGAGAATTTTGACATGGTACCTTCAACAAATATGATGCTCAATCTCTTCAATGGGATTACCTTGCTTCAAAAGCAAGCAGAAGAACTCTTTGCTACACTAACACCAAAACCTAGTTGCATAATTTCTGATTTTTGCATTCCTTGGACATCTGAAATTTCTCAAAAGTACAACATTCCAAGGATTTCTTTCCATGGGTTTTGTTGCTTCTGCCTTCATTGCACTGATGTGGTACGTTCTTCAAAGATTGATGAGACCATAACTTCAGATTCAGAATATTTCACTATTCCTGGCCTACCTGACCAAATTCAAGTTACTAAACTTCAATTACCAGGAAATATGAGTGTTAGTGATGAAGATAAGATGCAGGAGTTTAGGGAAAAGATGATTGATGCTGAAACAAAAGCATATGGTGTTATCATAAATACTTTTGAAGAGTTGGAGCAAGCATATGTCAATGATTACAAGAAGGAGAGAAATGATAAGGTATGGTGTATTGGACCAGTTTCACTAAGCAACAAAGATGAGTTGGATAAGGCTCAAAGAGGTAACAAGGCCTCAATTAACCAACACCATTGTTTGAACTGGTTAGATTTACAACAACCTAAGTCTGTAGTTTATGTCTGTCTTGGAAGCTTGTGCAACTTGATTCCTTCACAACTTATGGAGCTAGCTTTGGCCTTGGAATCAACACAAAGACCATTTATATGGGTTATTAGGGAAGGGAGTATCCTTAAGGAGTTAGAAAAGTTGATTAGTGAAGAAGGGTTTGAAGAAAGGATAGAAGGTAGAGGCCTTATAATTAGAGGTTGGGCACCACAATTGCTAATATTATCACACCATGCAATTGGAGGGTTTTTAACACATTGTGGTTGGAATTCAACACTTGAAGGGATTAGTGTTGGTGTGCCAATGATTACTTGGCCTTTATTTGCTGACCAATTCATGAATGAAAAGCTTGTTGTTCAGGTTTTGAAGATTGGTGTTAGCCTTGGTGTAGAGACTCCAATGAAATGGGGAGAGGAAGAGAAGAATGGTGTGTCATTGAAGAAGAATGATATTGAGAAAGCAATATGCATGGTTATGGATGAAGGTGAAGAAAGTGAAGAAAGAAGAGAAAGGGCCAAAAAACTCAGTGAGATGGCAAAAAAAGCAGTTGAAAAAGGAGGTTCTTCTAATCTTAATATGATTTTGCTTATCCAAGAAATAATGAAGTTACAAGAAAGTAAAGAAGATGATATAAATTTTACTCCAAAAGAGATACAAGTTACATGTTGCAATTGA 1527 0.3694 MVSETNIPHFTLFPLMAQGHIIPMMDIARLLSQHGVKVTIFTTPKNASRFTSVISRAVSSGLQIQLLLLQFPSKEVGLPEGCENFDMVPSTNMMLNLFNGITLLQKQAEELFATLTPKPSCIISDFCIPWTSEISQKYNIPRISFHGFCCFCLHCTDVVRSSKIDETITSDSEYFTIPGLPDQIQVTKLQLPGNMSVSDEDKMQEFREKMIDAETKAYGVIINTFEELEQAYVNDYKKERNDKVWCIGPVSLSNKDELDKAQRGNKASINQHHCLNWLDLQQPKSVVYVCLGSLCNLIPSQLMELALALESTQRPFIWVIREGSILKELEKLISEEGFEERIEGRGLIIRGWAPQLLILSHHAIGGFLTHCGWNSTLEGISVGVPMITWPLFADQFMNEKLVVQVLKIGVSLGVETPMKWGEEEKNGVSLKKNDIEKAICMVMDEGEESEERRERAKKLSEMAKKAVEKGGSSNLNMILLIQEIMKLQESKEDDINFTPKEIQVTCCN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1143 508 CDD GT1_Gtf-like 8 476 IPR002213 GO:0008194
Lan5g1143 508 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 487 - -
Lan5g1143 508 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 283 404 IPR002213 GO:0008194
Lan5g1143 508 Gene3D Glycogen Phosphorylase B; 275 468 - -
Lan5g1143 508 Gene3D Glycogen Phosphorylase B; 6 274 - -
Lan5g1143 508 ProSitePatterns UDP-glycosyltransferases signature. 352 395 IPR035595 -
Lan5g1143 508 PANTHER GLYCOSYLTRANSFERASE 5 494 - -
Lan5g1143 508 PANTHER GLYCOSYLTRANSFERASE 5 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1143 Lan-Chr5 24741897 24743639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1143 9 491 Glycosyltransferase AT2G36780 56.612 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1143 - - lja:Lj1g3v4690420.1 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1143 5 24741897 24743639 Lan5g1143 5 24741897 24743639 ECH
Lan9g0403 9 5870390 5872324 Lan5g1143 5 24741897 24743639 LSH