Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0392 ATGCATTCAGGTCATTTGCTTATTGAGGAACCCATTCGAATGGCTTCCATCCTTGAATCTTCTAAGCCTAGTTTTTTCCCTGCAATGACAAAGATTGTAGGTACCCTTGGTCCTAAATCTCGTTCACTTGAGGTTATCTCTGAATGTCTCAATGCTGGAATGTCTGTGGCTCGGTTCGACTTCTCTTGGGGCGACCCTGATTATCACCAGGAGACTTTGGAGAATTTGAAGGCTGCTATCAAGAATACCAGGAAGCTCTGTGCTGTTATGCTCGACACGGTCGGTGCAGAGATGCAGGTTGTTAACAAAACTGAGACACCTATCTCCCTTCAAGAAGATGCTGAGGTTGTCCTCACTCCTCATGAAGGACAAGAAGCCTCTTCAGAAACACTGCCTATCAACTTTGATGGACTAGCCAAGTCAGTGAAGAAGGGAGACACCATTTTTGTTGGTCAATACTTGTTTACAGGAAGTGAAACTACTTCTGTATGGCTTGAGGTAGCTAATGTCAAAGGGAAGGATGTCGTTTGTACTATTAAGAATTCGGCAACATTGGCTGGGTCAATGTTCACTTTGCACGCCTCTCAAATTCATATCGATTTGCCAACCCTCTCTGAGAAAGACAAGGAGGTTATAAGCACCTGGGGAGTAAAAAACAAAATTGATTTTCTGTCGTTGTCATATACTAGGCATGCTGAAGATGTTCGCCAAGCCCGTGAGTTCCTTTCTAAGTTAGGCGATCTCAGCCAGACTCAAATTTTGGCGAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACAAGAAGCAGATGGCATTATCCTTTCCCGTGGGAATTTGGGCATCGATCTTCCACCCGAGAAGGTGTTTTTGTTTCAAAAATCTGCCCTTTACAAGTGTAATATGGCCGGGAAACCAGCTGTTGTTACACGTGTTGTGGATAGCATGACGGACAACTTACGACCAACTCGTGCAGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTGGGTGCCGAGACTTTACGAGGGTTATACCCTGTTGAGACTATTTCTACTGTTGGCAAAATTTGTTCAGAGGCTGAGAAAGTTTTCAATCAAGACCTCTATTTTAAGAAGACAGTCAAACATGTTGGAGAACCCATGACCCACTTGGAATCTATTGCATCCACTGCGGTTCGAGCAGGTATTAAGGTGAAGGCCTCTGCTATCATTTGCTTCACTTCATCCGGAAGAGCTGCAAGATTGATAGCGAAGTATAGGCCAACAATGCCAGTTCTCTCAGTTGTGATCCCCCGAATTGTAACAAATCAACTAAAATGGAGCTTCATTGGAGCTTTCGAGGACCAAGTAGGAACTCGTATGTGGGAAAGCTTATTTACAACTAATGCAAGGCAATCACTTATCGTTAGAGGTCTCTTTCCCATGCTTGCCGATCCTCGTCATCCTGCCGAGTCAACTAGTGCAACAAACGAGTCCATTCTGAAGGTTGCGCTTGATCATGGAAAATCAAAAGGAGTTATAAAGTCGCATGATCGAGTTGTTGTTTGCCAGAAAGTTGGTGATGCATCTGTTGTCAAGATTATCGAGCTCGAAGATTAA 1629 0.4377 MHSGHLLIEEPIRMASILESSKPSFFPAMTKIVGTLGPKSRSLEVISECLNAGMSVARFDFSWGDPDYHQETLENLKAAIKNTRKLCAVMLDTVGAEMQVVNKTETPISLQEDAEVVLTPHEGQEASSETLPINFDGLAKSVKKGDTIFVGQYLFTGSETTSVWLEVANVKGKDVVCTIKNSATLAGSMFTLHASQIHIDLPTLSEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQILAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALYKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICSEAEKVFNQDLYFKKTVKHVGEPMTHLESIASTAVRAGIKVKASAIICFTSSGRAARLIAKYRPTMPVLSVVIPRIVTNQLKWSFIGAFEDQVGTRMWESLFTTNARQSLIVRGLFPMLADPRHPAESTSATNESILKVALDHGKSKGVIKSHDRVVVCQKVGDASVVKIIELED* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0392 542 SUPERFAMILY PK C-terminal domain-like 389 529 IPR036918 -
Lan9g0392 542 Gene3D - 30 362 IPR040442 -
Lan9g0392 542 PANTHER PYRUVATE KINASE 2 542 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 6 375 IPR015813 GO:0003824
Lan9g0392 542 PANTHER PYRUVATE KINASE 2 542 - -
Lan9g0392 542 Pfam Pyruvate kinase, alpha/beta domain 395 537 IPR015795 -
Lan9g0392 542 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 Gene3D - 363 540 IPR036918 -
Lan9g0392 542 SUPERFAMILY PK beta-barrel domain-like 103 187 IPR011037 -
Lan9g0392 542 TIGRFAM pyruv_kin: pyruvate kinase 30 450 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan9g0392 542 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0392 Lan-Chr9 5773191 5779066 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0392 K00873 - gmx:100781158 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0392 9 5773191 5779066 Lan20g1168 20 16603632 16605934 PCT
Lan20g1168 20 16603632 16605934 Lan9g0392 9 5773191 5779066 PCT