Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1168 ATGGTGAGCATAGATATTGAAGGAATAGTGAAAGAGGTGGGAAATGATGGAATGCGTGTACCAAAGACCAAGATAGTGTGTACTTTGGGTCCTGCTTCTCGATCTGTTGATATGATTGAGAAGCTTCTAAGGGCTGGCATGAATGTTGCTCGTTTCAATTTCTCTCATGGGACCCACGATTATCATCAGGGTACCCTTCACAATCTTAAGACTGCTATGCACAACACTGGCATCCTCTGTGCCGTCATGCTCGACACCAAGGGACCTGAGATTAGGACAGGTTTTCTGAAAGATGGAAAACCTATTCAGCTTAAAGAAGGACAAGAAATCACCATAACTACTGATTATGATATTAAGGGGGATACAGAGATGATATCAATGAGTTACAAGAAACTGCCTGTTCACCTCAAGTCAGGAAATATCATACTGTGCTCTGATGGAACAATTACACTCACTGTCTTATCTTGTGATCCAGATGCTGGTACTGTTAGATGTCGTTGTGAAAACACTGCAATGTTGGGTGAGAGGAAAAACGTTAATCTTCCCGGTGTCGTAGTCGATCTTCCTACTCTTACCGATAAGGATAAGGAAGACATTCTTCAATGGGGTGTCCCTAACAATATTGACATCATTGCTCTTTCATTTGTTCGTAAGGGCTCTGATCTTGTTAATGTCCGCAACGTTCTAGGTCCACATGCCAACCATATTCAATTGATGTCAAAGGTTGAGAATCAAGAGGGGGTGATGAATTTTGATGAGATCTTGCGTGAGACTGATGCATTCATGGTGGCACGTGGTGATCTTGGAATGGAAATCCCAGTTGAGAAGATTTTTCTAGCCCAGAAAATGATGATATACAAATGCAATCTTGTTGGTAAGCCTGTAGTCACTGCTACCCAGATGCTTGAGTCAATGATCAAGTCTCCCCGGCCAACCCGAGCTGAAGCAACTGATGTAGCTAATGCAGTTCTTGATGGAACTGATTGTGTCATGCTCAGTGGTGAAAGTGCAGCTGGCGCTTACCCTGAAATTGCTGTTAAAATCATGGCACGCATTTGTGTCGAAGCAGAATCATCCCTTGACTATGGTGCAATCTTCAAAGAGATGATAAGATCTACTCCTTTGCCTATGAGTCCATTGGAAAGCCTTGCATCATCTGCTGTTCGCACAGCTAATAAGGCCAAAGCTAAACTCATTGTAGTGCTGACACGCGGTGGGTCAACAGCCAAGTTAGTTGCTAAGTATAGACCAGCAGTGCCGATCTTGTCCGTCGTGGTTCCAGTTTTGACTACAGACTCATTCGATTGGACCTGCAGTGATGAGACACCAGCAAGGCACAGCTTAATATACAGGGGTTTGATTCCTCTATTGGCTGAAGGGTCTGCAAAAGCTACTGATACAGAATCCACTGAAGTTATTCTGGAAGCTGCTCTTAAGTCTGTAACTGAAAAGGGGCTTTGTAAGCCTGGTGATGCAGTTGTTGTCCTACATCGTATTGGAGTTGCCTCTGTTATAAAGATCTGCTTAGTAAAATGA 1536 0.4349 MVSIDIEGIVKEVGNDGMRVPKTKIVCTLGPASRSVDMIEKLLRAGMNVARFNFSHGTHDYHQGTLHNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITITTDYDIKGDTEMISMSYKKLPVHLKSGNIILCSDGTITLTVLSCDPDAGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTDKDKEDILQWGVPNNIDIIALSFVRKGSDLVNVRNVLGPHANHIQLMSKVENQEGVMNFDEILRETDAFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMARICVEAESSLDYGAIFKEMIRSTPLPMSPLESLASSAVRTANKAKAKLIVVLTRGGSTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPLLAEGSAKATDTESTEVILEAALKSVTEKGLCKPGDAVVVLHRIGVASVIKICLVK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1168 511 Pfam Pyruvate kinase, barrel domain 21 363 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 Gene3D - 357 498 IPR036918 -
Lan20g1168 511 SUPERFAMILY PK beta-barrel domain-like 89 188 IPR011037 -
Lan20g1168 511 TIGRFAM pyruv_kin: pyruvate kinase 22 500 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 Gene3D - 22 356 IPR040442 -
Lan20g1168 511 PANTHER PYRUVATE KINASE 1 511 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 Pfam Pyruvate kinase, alpha/beta domain 381 500 IPR015795 -
Lan20g1168 511 PRINTS Pyruvate kinase family signature 78 94 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PRINTS Pyruvate kinase family signature 208 222 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PRINTS Pyruvate kinase family signature 238 264 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PRINTS Pyruvate kinase family signature 265 289 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PRINTS Pyruvate kinase family signature 290 314 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PRINTS Pyruvate kinase family signature 315 333 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PRINTS Pyruvate kinase family signature 334 350 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 PANTHER PYRUVATE KINASE 1 511 - -
Lan20g1168 511 Gene3D - 89 189 IPR015806 GO:0004743|GO:0006096
Lan20g1168 511 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 15 362 IPR015813 GO:0003824
Lan20g1168 511 CDD Pyruvate_Kinase 21 510 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan20g1168 511 ProSitePatterns Pyruvate kinase active site signature. 236 248 IPR018209 GO:0004743|GO:0006096
Lan20g1168 511 SUPERFAMILY PK C-terminal domain-like 345 510 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1168 Lan-Chr20 16603632 16605934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1168 K00873 - gmx:100037452 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0392 9 5773191 5779066 Lan20g1168 20 16603632 16605934 PCT
Lan20g1168 20 16603632 16605934 Lan9g0392 9 5773191 5779066 PCT