Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0389 ATGGATCAACTTTCTTCTACTACTACTATTCTTCCTGAAGCATTTCAAGGAGCAAAAGATGATATTACTATGCAACTTTCTTTGATTTGGAGCCAAATAAAAGCACCATTGATTGTCCCTTTACTAAGAATATCAGTGGTTTTGTGCTTATGCATGTCTGTTATGATGCTTATAGAGAGGGTTTATATGGGAATTGTGATTAGTTTGGTGAAGTTATTTGGTAGAAAACCTGAGAAGCGTTATAAATGGGAGCCAATGAAAGATGATGTTGAGTTAGGAAACTCTTCTTATCCAATGGTCCTTGTTCAAGTCCCTATGTACAATGAAAGAGAGGTTTATCAACTATCAATTGGTGCTGCATGTGGCCTTTCTTGGCCTTCAGATAGGATCATCATACAAATCCTTGATGATTCCACTGACCCAACAATCAAGGAGTTGGTGCAACTAGAATGCCAAAGATGGGCAAGCAAAGGAGTGAACATAAAGTATGAGGTAAGGGACAATAGGAATGGTTACAAAGCAGGGGCACTAAAAGAAGGCATGAAGCGTAGCTATGTTAAGCAATGTGATTATGTTGCTATCTTTGATGCTGATTTTCAACCAGAGCCTGATTACTTGTGGCGCACCATTCCTTTCCTTGTTCACAATAATGAACTAGCCCTCATTCAAGCTCGTTGGAAATTTGTGAATTCTGATGAATGTCTAATGACCCGGATGCAAGAAATGTCACTGGATTATCATTTTACTGTGGAACAAGAAGTAGGGTCTTCCACTTATGCCTTCTTTGGCTTCAACGGGACTGCTGGAGTATGGAGAATTGCGGCACTGAATGAAGCTGGAGGGTGGAAGGATAGGACCACAGTGGAAGATATGGACTTGGCTGTTCGAGCTAGCCTTAAGGGATGGAAGTTCTTATACTTGTCTGATTTGAAGGTTAAAAATGAATTGCCAAGTACATTCAAAGCCTACCGTTACCAACAACATCGTTGGTCTTGTGGACCAGCAAATCTTTTCAGAAAAATGGTCATGGAGATTATAAGAAACAAGAAAGTGACATTGTGGAAGAAGATTCATGTGATTTATAGCTTCTTCTTTGTTCGAAAAGTTGTAGCACATATCACTACATTTGTGTTTTATTGCATCATATTACCTGCAACAGTTGTGGTACCTGAGGTTGTGGTTCCGAAATGGGGAGCTGTTTATATCCCTTCAATCATTACCCTTCTAAATGCAGTTGGAACTCCGAGGTCACTTCATTTACTGGTATTCTGGATTCTCTTTGAGAATGTGATGTCACTGCATCGAACAAAGGCAACAATTATCGGTCTGCTCGAGGCGAGTCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAGGGTAAAGCAGGAGTAAAAGCACCAAAGAAGCCTAGATTCAGAATTGGAGACAGGATTCACTTGTTAGAAATTGGTGTCGGATTCTACCTCTTCTTCATCGGCGTCTACGATGTTATGTTCGGGAAAAACCACTTCTTCATCTACCTTTTTATCCAAGCTTTTGCCTTTTTCATCATGGGATTTGGTTATGTTGGCACCTTTGTTCCTAGCTCCTAG 1605 0.4031 MDQLSSTTTILPEAFQGAKDDITMQLSLIWSQIKAPLIVPLLRISVVLCLCMSVMMLIERVYMGIVISLVKLFGRKPEKRYKWEPMKDDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQILDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDYLWRTIPFLVHNNELALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVTLWKKIHVIYSFFFVRKVVAHITTFVFYCIILPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKAGVKAPKKPRFRIGDRIHLLEIGVGFYLFFIGVYDVMFGKNHFFIYLFIQAFAFFIMGFGYVGTFVPSS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0389 534 Pfam Glycosyl transferase family group 2 191 382 IPR001173 -
Lan9g0389 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 314 IPR029044 -
Lan9g0389 534 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 2 533 - -
Lan9g0389 534 PANTHER - 2 533 - -
Lan9g0389 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 378 IPR029044 -
Lan9g0389 534 CDD CESA_CaSu_A2 98 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0389 Lan-Chr9 5726558 5733445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0389 3 533 Miscellaneous Gene Families AT5G03760 80.639 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0389 K13680 - gmx:100810016 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0389 9 5726558 5733445 Lan5g1134 5 24678223 24684673 LSH