Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1134 ATGGATCAACTTTCTTCAACTAATATTCTCCCTGAAGCATTTCATGGTGCCAAAGATGATATTGTTATGCAATTTGCATTGGTTTGGAGCCAAATAAAAGCACCATTGATTGTTCCTTTACTAAGAATAGGAGTGGTTTTGTGCTTATTCATGTCTGTGATGATGTTAATGGAGAGGCTTTATATGGGTATTGTCATTATTTTGGTGAAGTTATTTGGTAGAAAACCTGAGAAACGTTATAAATGGGAGCCAATGAAAGATGATATGGAGTTAGGGAATTCTTCTTACCCAATGGTTCTTGTTCAAGTCCCTATGTATAATGAAAGAGAAGTTTATCAACTATCAATTGGAGCTGCATGTGGCCTTTCTTGGCCTTCTGATAGGATCATCATACAAGTCCTTGATGATTCCACTGACCCAACAATCAAGGAGTTGGTGCAATTAGAATGTCAAAGATGGGCAAGTAAAGGTGTGAACATAAAGTATGAGGTAAGGGACAATAGGAGTGGATACAAAGCAGGGGCTCTAAAAGAAGGCATGAAGCGTAGCTATGTTAAGCAATGTGATTATGTTGCTATATTTGATGCTGATTTTCAGCCAGAACCTGATTTTTTATGGCGCACCATTCCTTTTTTAGTGCACAATTCTGAACTAGCCCTCATTCAAGCTCGTTGGAAATTTGTGAATTCAGATGAATGTTTGATGACTAGAATGCAAGAAATGTCACTAGATTATCATTTTACTGTGGAACAAGAAGTAGGGTCTTCCACTTATGCATTCTTTGGCTTCAATGGAACTGCAGGAGTGTGGAGAATTGCAGCTCTGAATGAAGCTGGTGGGTGGAAAGATAGGACCACAGTGGAAGATATGGACCTTGCTGTAAGAGCTAGCCTTAAGGGATGGAAGTTCTTATACTTGTCTGATTTACAGGTTAAAAATGAATTGCCAAGTACTTTCAAGGCTTACCGCTACCAACAGCATCGCTGGTCTTGTGGACCAGCAAATCTTTTCAGGAAAATGGCCATGGAGATTATCAGAAATAAGAAAGTGACATTGTGGAAAAAGATATATGTGATTTACAGTTTTTTCTTCGTTCGGAAGGTTGTAGCACACATCACCACATTTGTGTTTTATTGCATTATATTACCTGCAACAGTTGTAGTATCTGAAGTTGAAGTTCCAAAATGGGGTGCTGTTTATATCCCTTCAATCATTACCCTTCTAAATGCAGTTGGAACCCCAAGGTCACTCCATTTACTGGTATTCTGGATTCTCTTTGAGAATGTCATGTCTCTGCATCGAACTAAGGCGACAATTATCGGTCTACTCGAAGCTAGTAGAGTCAATGAATGGATTGTTACTGAAAAACTTGGAGATGCTCTAAAGGGTAAAGCAGGAACTAAAGCACCAAAGAAGCCTAGATTCAAAATTGGAGACAGGATTCACTTGTTAGAACTTGGTGTTGGATTCTACCTCTTCTTCATCGGCGTCTACGATGTTCTGTTCGGGAAAAACCATTTCTTCATCTACCTTTTTGTCCAAGCATTTGCCTTCTTCATCATGGGATTTGGATATGTTGGGACATTTGTTCCCAACTCCTAG 1602 0.392 MDQLSSTNILPEAFHGAKDDIVMQFALVWSQIKAPLIVPLLRIGVVLCLFMSVMMLMERLYMGIVIILVKLFGRKPEKRYKWEPMKDDMELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRSGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTIPFLVHNSELALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVTLWKKIYVIYSFFFVRKVVAHITTFVFYCIILPATVVVSEVEVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKAGTKAPKKPRFKIGDRIHLLELGVGFYLFFIGVYDVLFGKNHFFIYLFVQAFAFFIMGFGYVGTFVPNS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1134 533 Pfam Glycosyltransferase like family 2 98 332 - -
Lan5g1134 533 PANTHER BNAC09G36340D PROTEIN 1 532 - -
Lan5g1134 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Lan5g1134 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 377 IPR029044 -
Lan5g1134 533 PANTHER - 1 532 - -
Lan5g1134 533 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1134 Lan-Chr5 24678223 24684673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g1134 1 532 Miscellaneous Gene Families AT5G03760 80.113 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1134 K13680 - gmx:100810016 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1134 5 24678223 24684673 Lan5g1134 5 24678223 24684673 ECH
Lan9g0389 9 5726558 5733445 Lan5g1134 5 24678223 24684673 LSH