Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0359 ATGACGACGATGGATCCTTCTAGAACGCCACTTGGCCAAATGCTATTGGACGAAATCTCTCCGGTTATCATGCTCCTTTCTACTCCCGCCGTAGAAGATTCCTCCCTCAAAAACAACCTCACCTTTCTTCAAATGCTATCTCCTTTCTCTTCCTTCAATAACATCGACGTTCCTGTTAGAACCGCTAGTGATCAACCTTACCGGATTCACAAGTTCAAATTGCGGTTATTTTATGGTTCTGATGTTAGGAACCCTGATTTGAAGGTAGCTAAAGAGCGTTTGGAACGAGTTATTACGGAAGCGGGGGAGAAAGTGTTCACTGAGGTCACTTCAGATGCACCAGAAATTGATCAACATCAGAAACTTGACAGTTCTGAATACATAAATACACCATCATGGTTTCAATTTCTCAATAAAGAGCTTGTCCGTGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCTGTGGCATGTCTTCTAGCTGTCTCTTCAAAGGATGAAAAGCCTATTAACAGATTTGTTGATCTTTTTAATAGCAACAATCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAGATTTTGAAGCTTTACTTGTTAGTGCATGATAATCAAGATGGGTCTGTAGACAGAGCAAGTAGAATATTGACAGAAATGAGGAGTGCATTTGGTACAAGTAACTGTTTGTTGCTTTGCATTAATTCTTCACCAGATGCTCCAATCAAACATGAAGAAAATCCTTGGGCTTCATATATATCTGATGCCTCACCTAGTCAAGATCATGGTTGCCTTCTTAACATTGATGATATCAATGAGATCAAAGATCTAATGCAAAATTTATCATCTAAGCATATCATTCCAAACATGGAGCAAAAGATACGTGTGCTCAATCAACAGGTTTCTGCAACACGAAAAGGTTTTAGAAACCAAATAAAAAACTTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATTCTCTCAATGGTCCTATGTACAACTATAACTCCATTGAATCCCAGATTAGAGTTTTGGGTGATTATGCTTTCATGCTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGTACAGGAAATGATGGGACTTACGTACTTCATGTCGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAACATGCTTTTAACACATACTTAAAACTAGGATCTCTGGGTCAGCAAAATGCAACACGATGTGGTTTATGGTGGATAGAAATGTTGAAGGCACGAGATCAATATAAAGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATTTTACATTCTGCTGTTATGCTTGAACAAGCATCATACTGCTACTTGCTATCTAAACCCTCCATGTTGCGCAAATATGGATTTCATCTAGTGCTCTCTGGCGAGCAGTATAAAAAGTGTGATCAGGTCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTATTTTTAAAGAAACTACTTGGAGTTATATTGGTGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAGATCTTGGCCTGTAGTCACCAGTCCAAGTCAACTCAGGAATTATTCCTGGGTGACTTTCTTCAAATTGTTGAGAAAACAGGACAGACATTTGAGGTAACAAAGCTTCAATTGCCTGTGATCAACATCCCTTCACTCAAGGTCATCTTTGAAGATTACCGGACTTTTGGATCCCCTTCGTCTGCTAATACTAGTGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGATTCAATCATTCTCTGCTGCCAAGACAAACTGGTTGGAGTTGCAATCAAAGCTTGTCTCAAGGAAGCACAGTCAATCAAATGTTTGTGTTGCAGGGGAGGCTGTGAAAGTGAACATTGAATTCAAAAACCCTCTGCAAATCTCAATCCCCATATCTGGTGTTAGACTCATTTGCAAGCATTCCGCTATTACTGATGAAAATGAAAACAAGTCAAGTTTGGAGGATGGTAATGATGTTGATCATTTCAAGGAAATGAATTCAGACAATTCCTCATTTTTGGTGTCTGAGGTTGATTTCTTATTAGGAGGTGGTCAAACAAATCTGGCTCAATTATCAGTTACTCCCAAGGTAGAAGGTGCTCTTGAAATTCTTGGTGTTAGGTGGAAACTGTCAGGTACTATAGTTGGCTTTCACAAGTTTGAGTTGAGCCTCCCAAAGAATATTGTAAAAGCTAGAAGGAAAGGAAAGCGCTCACCTAATGACAAGTTTAAGTTTATGGTCATTAAGAGCATACCCAAACTTCAGGCTTCCATTAATTTGTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTAGAGTTGAAGAACCCATCCGAGTTTCCTGTCAAGAATCTGAAGATGAAGGTAAGTGATCCTAGATTCCTTATTATAGGGAATCATGGAGATATGAAGTCAGAGTTTCCTGCTTGCTTAACAAAGAAGACAGATTCATCAGTACAAAGTGATGTACATGCCAATAATAGTATCTTGTCTGACACAGTCTTTCTGTTTCCAGAGGGTACTTCAGTGCAAGGTGAAACACCTTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGAAATTTCCCTTTACTTGAGCATATATTATGAGATGGAAGATATATCGAGTGTCATCAAATATCGCACCTTGCGCTTGCATTATAACGTGCAGGTATTACCATCATTGGATGTCTCATTTCAAATTAGTCCTTCTCGATTGAGAATACAAGAATTCCTTGTTAGATTGGATGTTGTTAACAAGACAAGCTCGGAATGTTTCCAAGTTTCTCAATTGTCATCTATTGGGCAAAACTGGCAAATCTCATTACTTCAATCCCCTGATACTATTTTTCCTTCACAATCATTGATGGCTGGTCAAGCAGTATCATGTTTCTTCACACTAAAGAAATCAAGTACAATATCGACTTTTGAGGACAACATATCTACCGTGTCTGTCACAAGTGATGTAAGATTGGTTCCCCAAAGCAATGAGGATTTAGTTTACAATGTAAACAGTGCACCTTTGGTCAATTTCCACCATTATGAAAGATTGCAGCAGGAATTGTCACACGAGGTTGACTTAAATACTATTGATTTTGTATTGATCTCTCGACCACTCAAGAGTAACAGTAATCTTAGCTTTTCTGATCCTCCTCATGTTATGTCACATCATGCGAGTCACTCCAGCACTGCTAGCACAGGCCCTATTTCATGGCTGCTAGATGGACCTCAAACCTTGCATCATGATTTCTCTGAATCCTTCTGTGAAATAGATCTGAAGATGCATCTTTACAATTCTTCTGTTGCCACTGTTTTTGTGCGCATTGACACCTCAGATTCTGCTGGTATTATCAGACATACCAACAGTTTTGATGCAGTTCAATCAGCAACTCCTGATAACCAAGCAGGGTGGCATGATGTCTCAACAGTGAATGAACTTAAAGTCACCACATCAAATGCTCTTGAAACCCAACCAGGAAAGGCACTATCATTGGAAGGTGTTTCCCCTTACATTTGGTCTGGGTCAGGCTCTACCAGTGTCCACATTGAGCCTATGTCCTCCATGGAAATTCCTCTTCAGATATGTGTGTTCTCTCCTGGGACATATGACCTATCAAATTACACTTTGAGTTGGAATCTTCCATCCAAAGTTCCTGGAGATTCTAACGAAACGAAACATACTTCAGGCAAGTGCCTGGGGTATAAATACTATCTCACTGTTCTCCAATCCGCTTGA 3870 0.3982 MTTMDPSRTPLGQMLLDEISPVIMLLSTPAVEDSSLKNNLTFLQMLSPFSSFNNIDVPVRTASDQPYRIHKFKLRLFYGSDVRNPDLKVAKERLERVITEAGEKVFTEVTSDAPEIDQHQKLDSSEYINTPSWFQFLNKELVRVASFSDHEAFDHPVACLLAVSSKDEKPINRFVDLFNSNNLPSLLNDGAMDPKILKLYLLVHDNQDGSVDRASRILTEMRSAFGTSNCLLLCINSSPDAPIKHEENPWASYISDASPSQDHGCLLNIDDINEIKDLMQNLSSKHIIPNMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDGADSLNGPMYNYNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMSDQSRKEAEYCMEHAFNTYLKLGSLGQQNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCDQVKHAIRTYRSALSIFKETTWSYIGDHVHFHIGQWYASLGMYDVAVKHMMEILACSHQSKSTQELFLGDFLQIVEKTGQTFEVTKLQLPVINIPSLKVIFEDYRTFGSPSSANTSEGLWRSLEEEMIQSFSAAKTNWLELQSKLVSRKHSQSNVCVAGEAVKVNIEFKNPLQISIPISGVRLICKHSAITDENENKSSLEDGNDVDHFKEMNSDNSSFLVSEVDFLLGGGQTNLAQLSVTPKVEGALEILGVRWKLSGTIVGFHKFELSLPKNIVKARRKGKRSPNDKFKFMVIKSIPKLQASINLLPGKAYAGDLRQLVLELKNPSEFPVKNLKMKVSDPRFLIIGNHGDMKSEFPACLTKKTDSSVQSDVHANNSILSDTVFLFPEGTSVQGETPFLWPLWFRAAVPGEISLYLSIYYEMEDISSVIKYRTLRLHYNVQVLPSLDVSFQISPSRLRIQEFLVRLDVVNKTSSECFQVSQLSSIGQNWQISLLQSPDTIFPSQSLMAGQAVSCFFTLKKSSTISTFEDNISTVSVTSDVRLVPQSNEDLVYNVNSAPLVNFHHYERLQQELSHEVDLNTIDFVLISRPLKSNSNLSFSDPPHVMSHHASHSSTASTGPISWLLDGPQTLHHDFSESFCEIDLKMHLYNSSVATVFVRIDTSDSAGIIRHTNSFDAVQSATPDNQAGWHDVSTVNELKVTTSNALETQPGKALSLEGVSPYIWSGSGSTSVHIEPMSSMEIPLQICVFSPGTYDLSNYTLSWNLPSKVPGDSNETKHTSGKCLGYKYYLTVLQSA* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0359 1289 Gene3D Tetratricopeptide repeat domain 334 558 IPR011990 GO:0005515
Lan9g0359 1289 SUPERFAMILY TPR-like 433 555 IPR011990 GO:0005515
Lan9g0359 1289 PANTHER TRANSPORT PROTEIN TRAPP 10 1288 IPR024420 -
Lan9g0359 1289 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 192 523 IPR024420 -
Lan9g0359 1289 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 643 834 IPR013935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0359 Lan-Chr9 5422259 5443354 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0359 K20305 - gmx:100809666 2106.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0359 9 5422259 5443354 Lan5g1071 5 24001045 24015734 LSH