Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g1071 ATGATGGATCCTTCTAGAACGCCACTAGGACAAATGCTATTGGACGAAATCACTCCGATTCTAATGCTCCTTTCTACACCCACCGTAGAAGATTCCTGCCTCAAAAACGGCCTCACTTTTCTTCAAATGCTTTCTCCATTTTCCTCCTTCAACAACATTGACGTTCCTGTTAGAACCGCGAGTGATCAACCTTACCGCATTCACAAGTTCAAATTGCGCTTATTCTACGCTTCCGATGTTAGGAGCCCCGATTTGAAGGGAGCTAAAGAGCATTTGAAACACGTTATCACGGAAGCAGGGGAGAAAGTGTTCTCTGAGCTCACTTCAGATGAAGAAGAAATTGATCAACATCAACAACTTGCCAGTTCTGAATACAGAAATACACCATCATGGTTTCAACTTCTCAATAAAGAGCTTGTCCGCGTGGTTTCCTTTTCAGACCATGAAGCTTTTGACCATCCCGTGGCATGTCTTCTAGCTGTTTCTTCAAAAGATGAACAGCCTATTAACAGATTTGTTGACCTTTTTAATACCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAGATTTCGAAGCATTACTTGTTAGTGCATGATAATCAAGATGGCCATGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAGTACATTTGGTACAAGTAATTGTTTGTTTCTTTGCATTAATTCTACACCAGATGCTCCAATCAAACATGAAGAAAATCCTTGGGCTGCATTTGTATCTGATGCCTCACCTAGTAAAGATCTTGGTTGCTTTCTAAACATTGATGATATCAGTGAGATCAAAGATCTAATGCAAGATTTATCATCTAAACACATCATTCCAAACATGGAGCAAAATATACGCGTGCTCAATCAACAGGTTTCTGCATCCCGAAAAGGTTTTAGAAACCAAATAAAAAACTTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATTCTCTCAATGGTCCTATGTATAACTATAACTCCATTGAATCTCAGATTAGAGTTTTAGGTGATTATGCTTTCATGCTATGGGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACCGATTACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGTGCAGGAAATGATGGGACTTACATACTTCATGTCAGATCAATCAAGAAAGGAAGCTGAGTACTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGGTTGCCTGGTCAGCAAAATGCAACACGATGTGGCCTATGGTGGGTAGAAATGTTGAAGGCATGGGATCAATATAAAGAGGCAGCCACTGTTTATTTTCGTATTTGTGGTGAGGATATCTTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGCTATCTAGACCCTCCATGTTACGCAAATATGGATTTCATTTAGTGCTCTCTGGTGAGCAGTATAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAAAGGAACTACTTGGAGTTATATCTGTGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAGGTCTTGGCCTGTAGTCATCAGTCCAAGTCAATGCAGGAATTATTCGTGGGTGACTTTCTTAAAATTGTTGAGAAAACAGGACGGACATTTGAGGTAACAAAGCTCCAATTGCCTGTGATCAACGTCTCTTCTCTCAAGGTCATCTTTGAAGATTCCCGGACTTTTGGATCCCCTTTGGCTGCTAATACTAGAGAAAGCTTGTGGCGTTCTTTAGAGGAAGAAATGATTTCATCATTCTCTGCTGCCAAGACAAACTGGTTGGAGTTGCAATCAAAGCTTGTCTCAAGAAAGAATAGTCAATCAAATGTTTGTGTTGCCGGGGAGGCTGTGAATGTGATTATTGAATTCAAAAACCCTCTGCAAATTGCGATCCCCATATCTGGTGTTACACTCATTTGCAAGCATTCTGCTATTACTGATGAAGTTAGACTAGATGAAAACAAGTCAATTGTAGAGGATGATAATGACATTGATCACTTCAAAGATATGAGCTCAAACAATTCCTCAATTTTGATGTCCGAGGTTGATTTCTTACTAGGAGGTGGTGAAACAACTATGGTTCAACTATCAGTTACTCCCAGAGTAGAAGGTACTCTTGAAATTCTCGGTGTTAGGTGGAAACTGTCAGGTACAATAGTTGGCTTTCTCAAGTTTGAGTTGAGCCTCCCAAAGAATATTGTAAAATCTAGAAGGAAAGGAAAGCGCTCACCTAATGACAAGTTTAAATTTATGGTCATCAAGAGCATACCCAAACTTCAGGCTTCCATTAATTCGTTACCTGGAAAGGTGTATGCTGGAGATCTATGGCAACTTGTTTTAGAGTTGAAGAACCCATCCGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTTATTATTGGGAATCAGGAAGATATAAAGTCAGAGTTTCCTGCTTGTTTAACAAAGAAGATAGATTCAGGACAAAGTGATGCACATGCCAATCATAGTATCTTGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACTTCAGTTCAAGGTAAAACACCTTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCCGGTGAAATTTCCCTTTACTTGAGCATATATTATGAGATGGAAGATATATCGAGTATCATCAAATATCGCACCCTGCGCTTGCATTACAATGTGCAGGTATTACCATCACTGGATGTCTCGTTTCAAATTAGTCCTTCTCGATTGAGAATACATGAATTCCTTGTTCGATTGGATGTCGTTAACAAGACAAGCTCAGAATGCTTCCAAGTTTATCAGTTATCATCTATTGGGCACCATTGGCAAATCTCATTACTTCAACCTCCTGATACTATTTTTCCTTCACAATCATTGATGGCTGGCCAAGCAATATCATGTTTCTTCACACTAAAGAACTCAAGTAAATTATCTACTTCTGAGGACAACTTGTCTACCATGAATGTCACAAGTGATGTAATATTGGTTCCCCAAAGCAGTGAGGATTTACTTTACGATGTAAACAGTGCATCTTTGGTCAAGTTCCACCATTACGAAAGATTGCAGCAGGAATTGTCAGATGAGGGTGACTTAAATACTGTTGATTTTTTATTGATCTCTCAAACACTCAAGAGTACCAATAATCCTGGTTTTTCTGATCCTCCTCGTGTTATGTCACATCATGCGTGTCACTCCTGTATTGCTAGCACGGGCCCAATTTCTTGGCTGCTAGATGGACCTCAAACCTTGCATCATGATTTTTCTGAATCCTTCTGTGAAATAGATCTAAAGATGCATCTTTACAATTCTTCTGGTGCCACTGTTTTCGTACGGATTGACACCTCAGATTCTGCTGGTATCGGCGGACATACCAACAGTTTTAATGCGGTTCAATCAGCAATCCCTGATAACCAAGCAGGGTGGCATTATGTCCCACCAGTGAATGAACTTAAAGTCACCACATCAAATGTTCTTGAAACCCAACCAGGAAAGGCACTACCATTAGAAAGTGCTTCCCCATTCGTTTGGTCTGGGTCAAGCTCTACCAATCTCCATCTTGAGCCTATGTCCTTAGTGGAAATCCCTCTTCAGATTTGTGTATTCACTCCAGGGACATATGACCTATCAAATTACGCATTGAGTTGGAAACTTCCATCCAAAGTCCGGGGAGATTCTAACCAAACGAAACTGCGTTCAGGCAAGTGCCAGGGGTATAAACACTATCTTACTGTGCTCCAATCCATTTGA 3870 0.401 MMDPSRTPLGQMLLDEITPILMLLSTPTVEDSCLKNGLTFLQMLSPFSSFNNIDVPVRTASDQPYRIHKFKLRLFYASDVRSPDLKGAKEHLKHVITEAGEKVFSELTSDEEEIDQHQQLASSEYRNTPSWFQLLNKELVRVVSFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLPSLLNDGAMDPKISKHYLLVHDNQDGHADRASKILTEMRSTFGTSNCLFLCINSTPDAPIKHEENPWAAFVSDASPSKDLGCFLNIDDISEIKDLMQDLSSKHIIPNMEQNIRVLNQQVSASRKGFRNQIKNLWWRKGKEDGADSLNGPMYNYNSIESQIRVLGDYAFMLWDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMSDQSRKEAEYCMENAFNTYLKLGLPGQQNATRCGLWWVEMLKAWDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSRPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFKGTTWSYICDHVHFHIGQWYASLGMYDVAVKHMMEVLACSHQSKSMQELFVGDFLKIVEKTGRTFEVTKLQLPVINVSSLKVIFEDSRTFGSPLAANTRESLWRSLEEEMISSFSAAKTNWLELQSKLVSRKNSQSNVCVAGEAVNVIIEFKNPLQIAIPISGVTLICKHSAITDEVRLDENKSIVEDDNDIDHFKDMSSNNSSILMSEVDFLLGGGETTMVQLSVTPRVEGTLEILGVRWKLSGTIVGFLKFELSLPKNIVKSRRKGKRSPNDKFKFMVIKSIPKLQASINSLPGKVYAGDLWQLVLELKNPSEFPVKNLKMKISHPRFLIIGNQEDIKSEFPACLTKKIDSGQSDAHANHSILSDTVFLFPEGTSVQGKTPFLWPLWFRAAVPGEISLYLSIYYEMEDISSIIKYRTLRLHYNVQVLPSLDVSFQISPSRLRIHEFLVRLDVVNKTSSECFQVYQLSSIGHHWQISLLQPPDTIFPSQSLMAGQAISCFFTLKNSSKLSTSEDNLSTMNVTSDVILVPQSSEDLLYDVNSASLVKFHHYERLQQELSDEGDLNTVDFLLISQTLKSTNNPGFSDPPRVMSHHACHSCIASTGPISWLLDGPQTLHHDFSESFCEIDLKMHLYNSSGATVFVRIDTSDSAGIGGHTNSFNAVQSAIPDNQAGWHYVPPVNELKVTTSNVLETQPGKALPLESASPFVWSGSSSTNLHLEPMSLVEIPLQICVFTPGTYDLSNYALSWKLPSKVRGDSNQTKLRSGKCQGYKHYLTVLQSI* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g1071 1289 Gene3D Tetratricopeptide repeat domain 331 557 IPR011990 GO:0005515
Lan5g1071 1289 SUPERFAMILY TPR-like 431 553 IPR011990 GO:0005515
Lan5g1071 1289 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 174 521 IPR024420 -
Lan5g1071 1289 PANTHER TRANSPORT PROTEIN TRAPP 8 1288 IPR024420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g1071 Lan-Chr5 24001045 24015734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g1071 K20305 - gmx:100809666 2135.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0359 9 5422259 5443354 Lan5g1071 5 24001045 24015734 LSH