Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0345 ATGGAGAATCAACATGGAACAAAGATTAATCTTGAGAAATTCACTTGGATAATTGAAAGTTTCTCAAAGAAGAACACCAAGAAACTACGGTCCAAGTCTTTTGTTATTGGGGGTTGTAGATGGAGGATAGTTGTGCAACCAATAGAGAAAGGTGTGGACCATTTATCACTGTGTTTGAAGATTTCGGGTCCTTTACCAGCATATGGATGGAGCAAATTTGCTTATTTCAAATTATCTCTAATCAACCAAATGGATAATGAGAAATCAATTGTAAAAGAAACTCAACAGAAGTTTGATTCAAGATATCGAATTTGGGGCTCATCATTCATGCATCTAAGCGACTTTTATAATCCGAAACAAGGATATCTCATAAACGGCCATTGCATCATTGCAGCCCAAGTTGCTGTTTCAGATCATGCATTTCAAATTACTACTCCATCTCTAACCAATAGCATCTCTGTAGCTAGACTAATAGAATATTCTGAAGAGACAAGGAATTCCACAATACAAACAAAATCAGAATTTCGATCTCAGGAAGATTTCGGAATTGTGATTCCACCCTCAGAAAGGACACATAGTCCTAACCATGGACACATAAACAAACCCTCTTTTTACCCTTCTATATATGATGATGGACCTAAGGAAGTTCCCGTAATACATCTTAGTGAAATCCTAGATATCAATAGTTTAGGACCAGAAGAAGCAACATTTTTTCCACTTTTAGAAGAGGTTTGTTTATGTCATCCTTCATTGATAGAAAGCCAGATGAAAAAAAGTCCTAAGTACATTCTATGGGCATTCATAACTTTGGGTCAAGTCCTACATTTCCTTAAGACTACGAAGATGAAGAACATGGACGAGAAAGCGCGGGAAAACCTCGAATGTCTATGGGAAGAAGTTCAGTTGTTTGGATTTGACTTGACATGGCTAGAACCATATATTCAATCTGCATTGGATGTTAAAGCATACTTGGAAAAAGCTGAGAAAGTGAAGAATCTAAAAGATATTGTGGTTTATTTGGAGACTGAAGTGAGGAAGCTAAGAACAAAACTAGCTATTGCAGAAGTAGATGTTGATATAGCAAGGAAAGATTTGGAAGAAGTAGAAATGGGTTTGGAAGAGAGGAACATTGATGCAAAACTTGGTTATGACATATAA 1158 0.3644 MENQHGTKINLEKFTWIIESFSKKNTKKLRSKSFVIGGCRWRIVVQPIEKGVDHLSLCLKISGPLPAYGWSKFAYFKLSLINQMDNEKSIVKETQQKFDSRYRIWGSSFMHLSDFYNPKQGYLINGHCIIAAQVAVSDHAFQITTPSLTNSISVARLIEYSEETRNSTIQTKSEFRSQEDFGIVIPPSERTHSPNHGHINKPSFYPSIYDDGPKEVPVIHLSEILDINSLGPEEATFFPLLEEVCLCHPSLIESQMKKSPKYILWAFITLGQVLHFLKTTKMKNMDEKARENLECLWEEVQLFGFDLTWLEPYIQSALDVKAYLEKAEKVKNLKDIVVYLETEVRKLRTKLAIAEVDVDIARKDLEEVEMGLEERNIDAKLGYDI* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0345 385 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 369 - -
Lan9g0345 385 SMART math_3 13 115 IPR002083 GO:0005515
Lan9g0345 385 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 151 IPR008974 GO:0005515
Lan9g0345 385 Pfam MATH domain 20 135 IPR002083 GO:0005515
Lan9g0345 385 SUPERFAMILY TRAF domain-like 13 137 - -
Lan9g0345 385 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Lan9g0345 385 CDD MATH 13 134 IPR002083 GO:0005515
Lan9g0345 385 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0345 Lan-Chr9 5260593 5263336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0345 - - ahf:112695910 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0345 9 5260593 5263336 Lan5g1052 5 23866884 23869690 LSH