Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0332 ATGGCTCTTTCAATCTCATCCTCTCTCACTCTCCATTCTCACTCATTCTTCAACCATCAACAAAAACGCTCTTTCACCACCTCAAACGTCGTCGTATGCTCCGCTAAATCCGTCCACCCTCCCAAGCTCAGCGCCGCCGCCGCCGCCGCTCGAATCGAATCGCTGAGTCAGGTTTCCGGCGTATTGGGTTGTCAATGGGGCGATGAAGGAAAAGGTAAACTCGTTGATATCTTAGCCCAGCATTTTGAAATCGTTGCTCGATGTCAGGGTGGAGCTAATGCTGGCCATACCATTTATAATTCGGAAGGGAAGAAGTTTGCCCTTCATCTTGTTCCATCCGGTATCCTTAATGAGGATACTCTGTGTGTTATTGGGAATGGAGTTGTAGTGCATCTGCCTGGGCTCTTTCAAGAAATCGATGGACTTGAATCGAATGGGGTTTCTTGCAAGGGAAGGATATTGATATCTGATCGAGCTCACCTGTTGTTTGATTTCCACCAAACAGTGGATGGGCTGAGAGAATCTGAGCTTGCTAAATCATTCATTGGAACAACTAAGAGAGGCATTGGACCATGCTACTCCAGCAAGGTTAACCGTAATGGCATTAGAGTAAGTGACTTGAGGCACATGGATACTTTTCCTCACAAGCTTGATCTTTTGTTATCGGATGCGGCATCAAGGTTCAAAGATTTCAAATATGGTCCAGACGTGCTAAAAAAAGAAGTTGAAAATTACAAGAGATATGCCGAAAGATTGGAACCCTTCATTGCTGATACTGTGCATGTCATGAATGATGCCATAGCACATAAGAAGAAAATTTTGGTTGAAGGAGGTCAAGCAACCATGCTTGACATTGATTTTGGCACTTATCCCTTTGTTACTTCATCTAGCCCTTCTGCAGGTGGGATTTGCACTGGTCTTGGTATTGCTCCGAGAGCTATCGGTGATTTAATAGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCAGGTCCTTTCCCTACAGAAATGTTGGGTCCAGGAGGTGATCTCCTTAGATTTGCTGGGCAGGAGTTTGGCACAACCACTGGCCGTCCTCGACGCTGTGGTTGGCTTGATATAGTTGCATTAAGATTCTCCTGTCAGATCAATGGGTTTTCATCCCTGAATCTCACCAAGCTGGATGTTTTATCAGATCTCGATGAAATACAGTTAGGTGTTGCTTATAAGCATGTTGATGGCGCCACAGTCAATTCATTCCCTTCAGATCTCCGTCTTCTAGAGCAATTGAAGGTTGAATATGAAGTACTTCCTGGATGGAAGTCTGATATTTCTAAAATTAGAAATTATTCCGACCTTCCAAAAGCTGCGCGGCAGTACGTGGAAAGGATCGAAGAGCTTGTTGGTACCCCTATCAACTACATTGGTGTTGGGCCGGGACGTGATGCTCTCATATATAAATGA 1443 0.4477 MALSISSSLTLHSHSFFNHQQKRSFTTSNVVVCSAKSVHPPKLSAAAAAARIESLSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFQEIDGLESNGVSCKGRILISDRAHLLFDFHQTVDGLRESELAKSFIGTTKRGIGPCYSSKVNRNGIRVSDLRHMDTFPHKLDLLLSDAASRFKDFKYGPDVLKKEVENYKRYAERLEPFIADTVHVMNDAIAHKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRAIGDLIGVVKAYTTRVGSGPFPTEMLGPGGDLLRFAGQEFGTTTGRPRRCGWLDIVALRFSCQINGFSSLNLTKLDVLSDLDEIQLGVAYKHVDGATVNSFPSDLRLLEQLKVEYEVLPGWKSDISKIRNYSDLPKAARQYVERIEELVGTPINYIGVGPGRDALIYK* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0332 480 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 61 320 IPR042109 -
Lan9g0332 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 479 IPR027417 -
Lan9g0332 480 Hamap Adenylosuccinate synthetase [purA]. 1 480 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan9g0332 480 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 321 480 IPR042111 -
Lan9g0332 480 ProSitePatterns Adenylosuccinate synthetase active site. 188 199 IPR033128 -
Lan9g0332 480 CDD AdSS 57 479 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan9g0332 480 TIGRFAM purA: adenylosuccinate synthase 61 478 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan9g0332 480 SMART adenylsucc_synt 58 479 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan9g0332 480 PANTHER ADENYLOSUCCINATE SYNTHETASE 14 480 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan9g0332 480 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 65 72 IPR018220 GO:0005525
Lan9g0332 480 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 14 480 - -
Lan9g0332 480 Pfam Adenylosuccinate synthetase 61 478 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan9g0332 480 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 157 255 IPR042110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0332 Lan-Chr9 5125927 5129042 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0332 K01939 - gmx:100792329 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0332 9 5125927 5129042 Lan19g0294 19 3186484 3189373 LSH