Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0294 ATGACATTCTCAACCTCAATCTCTTCTTCTCACTCCATTTTCAACTTTCAACAACAACGCTACTTCAATCTTCACCATTCCCACACCACCCGAAACGTCGTCGTATGCTCTGCAAAACCCATTTCTCCGCCGAAGCTCAGCGCCGTCGATTCCTCCAAGGATCGAATCGGGTCCCTGAGTCAGGTTTCAGGAGTATTGGGTTGTCAATGGGGTGATGAGGGTAAAGGTAAACTCGTTGATATCTTAGCCCAACACTTTGAAATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGCCATACCATTTATAATTCGGAAGGGAAGAAGTTTGCCCTTCATCTTGTTCCGTCCGGTATCCTTAATGAGGATACTCTCTGTGTTATTGGGAATGGAGTTGTGGTGCATCTGCCAGGGCTGTTTAAAGAAATTGATGGGCTTGAATCGAATGGGGTCTCTTGCAAGGGAAGGATATTGATCTCTGATCGTGCTAACCTGTTGTTTGATTTCCACCAAACAGTGGATGGGCTGAGAGAAGCTGAGCTTAATAAATCTTTCATTGGCACAACTAAGAGAGGCATTGGACCGTGCTACTCCAGCAAGGTTAACCGTAATGGCATTAGAGTGGGGGACTTGAGACACATGGATACTTTTCCTCAGAAGCTTGATCTTTTATTATCGGACGCGGCATCAAGGTTCCAAGATTTCAAATATGGTCCAGAGGTGCTCAAAGAAGAAGTTGAAAATTACAAGAGATATGCTGAGAGATTGGAACCCTACATTGACGATACTGTTCATGTCATAAATGATGCCATAGCACAAAAGAAGAAGATTTTGGTTGAAGGAGGTCAAGCTACCATGCTGGACATTGATTTTGGCACTTATCCCTTTGTTACTTCATCTAGCCCTTCTGCTGGTGGGATATGCACTGGTCTTGGTATTGCTCCAAGAGCTATCGGTGATTTAATAGGAGTGGTGAAAGCATACACTACACGAGTTGGTTCTGGTCCTTTCCCTACAGAAATTGTGGGTCCAGGAGGTGATCTCCTTAGATCTGCTGGCCATGAGTTTGGCACAACCACTGGCCGTCCTCGACGCTGTGGTTGGCTTGATCTAGTTGCATTAAGATTCTCCTGTCAGATCAATGGTTTTTCGTCACTGAATCTTACCAAGCTGGATGTTTTATCGGATCTTGATGAAATACAGTTGGGTGTTGCTTATAAGCATGCTGATGGTACCACAATCAATTCATTCCCTTCAGATCTCGATATTCTTGAGCAGTTGAAGGTTGAATATGAAGTACATCCTGGATGGAAGACTGACATTTCTAAAATTAGAAACTACTCCGACCTCCCTAAAGCTGCGCGGCAATATGTGGAAAGGATAGAAGAGCTTGTTGGTACCCCTATCCACTACATTGGTGTTGGGCCCGGACGTGATGCTCTCATATATAAATGA 1455 0.446 MTFSTSISSSHSIFNFQQQRYFNLHHSHTTRNVVVCSAKPISPPKLSAVDSSKDRIGSLSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILISDRANLLFDFHQTVDGLREAELNKSFIGTTKRGIGPCYSSKVNRNGIRVGDLRHMDTFPQKLDLLLSDAASRFQDFKYGPEVLKEEVENYKRYAERLEPYIDDTVHVINDAIAQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRAIGDLIGVVKAYTTRVGSGPFPTEIVGPGGDLLRSAGHEFGTTTGRPRRCGWLDLVALRFSCQINGFSSLNLTKLDVLSDLDEIQLGVAYKHADGTTINSFPSDLDILEQLKVEYEVHPGWKTDISKIRNYSDLPKAARQYVERIEELVGTPIHYIGVGPGRDALIYK* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0294 484 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 69 76 IPR018220 GO:0005525
Lan19g0294 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 483 IPR027417 -
Lan19g0294 484 Pfam Adenylosuccinate synthetase 65 482 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan19g0294 484 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 17 484 - -
Lan19g0294 484 CDD AdSS 61 483 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan19g0294 484 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 325 484 IPR042111 -
Lan19g0294 484 Hamap Adenylosuccinate synthetase [purA]. 1 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan19g0294 484 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 65 324 IPR042109 -
Lan19g0294 484 SMART adenylsucc_synt 62 483 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan19g0294 484 TIGRFAM purA: adenylosuccinate synthase 65 482 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan19g0294 484 PANTHER ADENYLOSUCCINATE SYNTHETASE 17 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lan19g0294 484 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 161 259 IPR042110 -
Lan19g0294 484 ProSitePatterns Adenylosuccinate synthetase active site. 192 203 IPR033128 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0294 Lan-Chr19 3186484 3189373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0294 K01939 - gmx:100792329 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0332 9 5125927 5129042 Lan19g0294 19 3186484 3189373 LSH