Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0301 ATGTCGACGGCGACGGCGAACCTCCGATCTCCGATCAACACTTCCTCCGTCGATTCCACCTCTCACTCTCCTCCTCCTCCTCCTCTTCAACCTCTTCATCAAACACCTTTCCCTCATTTCAACGCCGGCACCTTACCCTCTTCCTCCACCGCACGCGCGAGATCAAAACCTCGCCTCGTTAAGCTGAGGAAACATTCCGCGAAGTCCAGAACAAGAACCACCGCCTCCGGATTCAATCCGTTTTGCTACGATCAGGTAACCGTCAATGTTGTTAGTGATGATAGTTCTCGCAAGTTTGGGGACACTGGTTTTGTGTTCTCCGCTTCTGGTTCTGGTAGGGATTTGAATTACGAGCAGAAAGAAGATTTGAAAATTGAGAAAGAAACGGAGTTTAGGAATAGTGGTGGCGTGGAATTTGTGTTTAGTGCTAAAGGGAGTGAGGTGGAATCGAATTCGCAAGAAAATGAAGCGAGGATTGTTTCTGGCGAGGGAGAGTTTAGTAGTGAGGGTTTTGTTTTTAATTCTAAAGGAAACAATTTGGGTTCTAGTTCTAATTCAGAAAAGGGAAAATCTGGTGAGGTTGAGTGTGAAAAGCCGAAGTGTTTTGATTTTGTTTTCGGTGATGATCGTAGCGGTAAAGTGCCAAATTTTAATGTGGAAAAGCAGGAGTCTCTTGGCGGCATGAGAAATTTGGATAGTGTTACTGGAACAAATAAAGATGTTCATCAGAATGGTCATTTGGGTGATAATGATATTGATAAAGGTAAGAGTGAATGTGGAAGTAGTAATTGCAGTTCTACTGCTTATAGTGTTTTTCCTTCGTATAAATTAACTGATGAGATAAAGAAACTGAGCATCAATCAATGTGAGGGTGCTGGTATCAACAGAGGTTCTACTAATTCATATGTAAGTAGTATTGGTGGTTTTGTGTTTGGAGGAAGTGAGAAGGGTTGTGGCAATTTTGGTGTTAGTTCAGGAACTAATTCTAGTTGTCAAGAGTCTTGTACTGATGCTACTTCTGAGAATATTGGTGGGAAGTTTTTCAAAGAATGTGAAAGGAATGATGATAAAAATGGAACTGGTTGTGGTATTGCATGTGGTTCCGCAGGTGCCCCTTGCTCTAAGCCATCTACTAGAGAAGAAGGTATCAGACAATTTCAGTGTGGAAAAATTCCAGCATCTGAAGAATCACAACTGAACGGAGCTACAGAACCATTTTCCTCCTCATCATTTGGTCTGGACTCCATTCGAAATAATTATGCTTCCACCAGCTATCCCGTTAGTGAGGGTCATGATAAGAGCAAGAATAGTTTTACAAGAACCCCAGACACATCAAAGGAGCCTTTTATGGACTTTAAACCCCCAACATGGGATCCTTCTTGTTTTAGAGAGAACTTATTTCCGGAGTTGAATAAAAAATCTGAATTGACAAAAAAGGGAAGATCTTCTAAAGAAAAAGGATCGAAACATACAAGGAGAAAATTGAAGCCACATTCCCTGAATAAGAAACCTACAAGTCTGGATCATTTGTTAAAGGAAAACAGTTCCCTTGAATCCCCACATTGTTCTGGTAGCCACTCACCCATGGATTTTTCTCCTTATCAAGAAACAAGAGCAGATGATCAAGATGTAAAAGCATCAGAAGAATTAAATGATTTGCACTCAAAATTTCCCACTGATTATAAAGATGAACACTTTGCTGCTGCAAACAGAGCAGTAGATACTAATACAACTGATCAAAGACACGGAGATCTAGATAGCGGCAAGTTATTTTCACGCAATGGAAGTCGCGGTGTTGGGAATTTTCATTCTTCTGGCCCCGAATTAGTCTGGCCTAGTTTGAAAACCGAGCAGTTCAACAGTAGTATAGTAGGTGCTTCTATAGATGCTGGGATTGACTTTAGCTCAAACACCGAAAAGCATAAAGCTGATCTATTTTGTTTTGTTCATGGTCCGGGTGATTCAAAGGAGACAGATTTTGCATTTTCTGCATCATCAACTGTACAGGGTACTTCTTCATTTAAGTGTAAACAGAAGAAGAAATATAGAAGGAGAAAGGGCTGCAACACATTTGTTATATCTCCAGATATGAATGGGAAGTTTAAATCTTCTGTTCAATTTTCACCACTTACTACTGCCAACATGTCATCACAATCTGATGGGGTGAATAGGCCTCAGACACATGACCAGTTCAAGGAAGGGGGTATTGCATACTCATCTGCAATTCATGAAGCCTGTGAAAAGTGGAGACTCAGGGGAAACCAAGCATATAAAGATGGGGATCTTTCTGAAGCTGAGGACTTCTACACACTAGGAATAAATTCTGTCCCCTCAAGTGAAAGACCAGGATGTTTGATTAAGCTCCTTTTACTATGCTATAGCAACCGTGCAGCCACACGCATGAGACTTGGAAGGATTAGAGAAGCTCTGGGGGATTGCCAGTTGGCTACTTCTCTGGATCCTACCTTTCAGAAAGCACAGATGAGAATTGCTAACTGTCACCTTTTGCTAGGAGAAGTAGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGGAGGGTCATAGTAGAAGCAGCTGAAGGGTTACAGAAGGCTCAGAAAGTGGTTGAGTGTCTAAATGGTGCTGCTGAACTTTTGAAGAAGAGGACTTCTGATGCAGCTGGTAATGCTTTGGAACTACTTACAACAACATTGTCAATAAGTTCATACTCAGAAAAATTGCTTCAAATGAAAGCAGAGGCTCTATGTTTGCTGCAAAAGTATGATGCAGCAATTCAGCTTTGTGAACATAGCCAATATCTTGCAGAACAGAACTCTGTGGCCTTGTCAAACAGTGGCAACAATTCCAATATTTCCACGTGTGATAGTTATACATCCGTAAACTTGTGGAGGTGGTCATTGATATCAAAGTGTTACTTTCATCTTGGAAAGCTTGAGGCATCACTTAACGTTCTTGAGAAATTACAGCAAGTTGTATCTGTCAATGACAGGTGTGTGATTGATTACATTGAAGAGTCACTGTCACTAGCTGCTACAATAAGAGAACTTCTAGATCACAAGACTGCAGGAAATGAGAAGTTTAAATTGGGAAAGTATAAAGAAGCAGTGGAGAGTTACACTGTTGCTTTATCTAGCAATATCAAATCACGTCCTTTTGCAGCTATATGTTTCTGCAATCGTGCTGCTGCTCATCAAGCTTTAGGCCAAATTGCTGATGCCATTGCAGACTGCAGTATGGCTATGGCCATCAATGGAGTGTATGCAAAGGCAATTTCAAGAAGAGCCACCTTACATGAGAAGGTTAGAGATTATGGTCAAGCAGCTTGTGACCTTAGGAAATTTATATCTGTTCTTGAAACTCAATCCGATGATAAGACCAAACAATCTGACTCACCAAGTGGATCAAATGGAGTGAAAGAGTCAAGGCAGGCTCATCAATGGCTGCTTTCTGTGGAAGATCAAGCCAAAAAGGAAATCCCTTTGGACTTTTACCTCATCCTTGGAATTAAAGCAGCTGATACATCATCTGATATCAAGAAGGCATATCACAAGGCAGCTCTCAGACATCACCCAGACAAAGCTGGACAATTGCTGCCAAGAAGTGAAATCGGAGATGAAGGCCAAGTCTGGAAGGAAATTTCACAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTGCTCTCTGACCCTGCCAAGCGCGCAGAATATGATTTGGAAGAAGAGATAAGGAAAGCTCGTCAAAGTAGCCAAGGTGGCACATGCAGCAGATCTTCAAATTTTTATGGGTACGGAACACCATCTGGTGTTTATAGATCTCCCTCTGACAAAACTTCTAGCAGACGGTATTATGGACAACAATCGCAACATCAATGGAAGACACATGGACATTCATATTCATATTCTCGATGGTAA 3963 0.4138 MSTATANLRSPINTSSVDSTSHSPPPPPLQPLHQTPFPHFNAGTLPSSSTARARSKPRLVKLRKHSAKSRTRTTASGFNPFCYDQVTVNVVSDDSSRKFGDTGFVFSASGSGRDLNYEQKEDLKIEKETEFRNSGGVEFVFSAKGSEVESNSQENEARIVSGEGEFSSEGFVFNSKGNNLGSSSNSEKGKSGEVECEKPKCFDFVFGDDRSGKVPNFNVEKQESLGGMRNLDSVTGTNKDVHQNGHLGDNDIDKGKSECGSSNCSSTAYSVFPSYKLTDEIKKLSINQCEGAGINRGSTNSYVSSIGGFVFGGSEKGCGNFGVSSGTNSSCQESCTDATSENIGGKFFKECERNDDKNGTGCGIACGSAGAPCSKPSTREEGIRQFQCGKIPASEESQLNGATEPFSSSSFGLDSIRNNYASTSYPVSEGHDKSKNSFTRTPDTSKEPFMDFKPPTWDPSCFRENLFPELNKKSELTKKGRSSKEKGSKHTRRKLKPHSLNKKPTSLDHLLKENSSLESPHCSGSHSPMDFSPYQETRADDQDVKASEELNDLHSKFPTDYKDEHFAAANRAVDTNTTDQRHGDLDSGKLFSRNGSRGVGNFHSSGPELVWPSLKTEQFNSSIVGASIDAGIDFSSNTEKHKADLFCFVHGPGDSKETDFAFSASSTVQGTSSFKCKQKKKYRRRKGCNTFVISPDMNGKFKSSVQFSPLTTANMSSQSDGVNRPQTHDQFKEGGIAYSSAIHEACEKWRLRGNQAYKDGDLSEAEDFYTLGINSVPSSERPGCLIKLLLLCYSNRAATRMRLGRIREALGDCQLATSLDPTFQKAQMRIANCHLLLGEVENAQQCFNKCMESGSVVCLDRRVIVEAAEGLQKAQKVVECLNGAAELLKKRTSDAAGNALELLTTTLSISSYSEKLLQMKAEALCLLQKYDAAIQLCEHSQYLAEQNSVALSNSGNNSNISTCDSYTSVNLWRWSLISKCYFHLGKLEASLNVLEKLQQVVSVNDRCVIDYIEESLSLAATIRELLDHKTAGNEKFKLGKYKEAVESYTVALSSNIKSRPFAAICFCNRAAAHQALGQIADAIADCSMAMAINGVYAKAISRRATLHEKVRDYGQAACDLRKFISVLETQSDDKTKQSDSPSGSNGVKESRQAHQWLLSVEDQAKKEIPLDFYLILGIKAADTSSDIKKAYHKAALRHHPDKAGQLLPRSEIGDEGQVWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRAEYDLEEEIRKARQSSQGGTCSRSSNFYGYGTPSGVYRSPSDKTSSRRYYGQQSQHQWKTHGHSYSYSRW* 1321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0301 1320 MobiDBLite consensus disorder prediction 424 456 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 571 592 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 228 253 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 1261 1306 - -
Lan9g0301 1320 ProSitePatterns Nt-dnaJ domain signature. 1234 1253 IPR018253 -
Lan9g0301 1320 PRINTS DnaJ domain signature 1173 1191 IPR001623 -
Lan9g0301 1320 PRINTS DnaJ domain signature 1191 1206 IPR001623 -
Lan9g0301 1320 PRINTS DnaJ domain signature 1229 1249 IPR001623 -
Lan9g0301 1320 SUPERFAMILY TPR-like 1028 1125 IPR011990 GO:0005515
Lan9g0301 1320 MobiDBLite consensus disorder prediction 228 243 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 483 500 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 40 54 - -
Lan9g0301 1320 ProSiteProfiles dnaJ domain profile. 1171 1257 IPR001623 -
Lan9g0301 1320 Gene3D Tetratricopeptide repeat domain 1024 1143 IPR011990 GO:0005515
Lan9g0301 1320 MobiDBLite consensus disorder prediction 469 542 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 510 532 - -
Lan9g0301 1320 SMART dnaj_3 1170 1249 IPR001623 -
Lan9g0301 1320 Gene3D Tetratricopeptide repeat domain 739 897 IPR011990 GO:0005515
Lan9g0301 1320 SUPERFAMILY Chaperone J-domain 1130 1253 IPR036869 -
Lan9g0301 1320 CDD DnaJ 1171 1246 IPR001623 -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 1 20 - -
Lan9g0301 1320 Gene3D DnaJ domain 1158 1275 IPR036869 -
Lan9g0301 1320 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1320 - -
Lan9g0301 1320 MobiDBLite consensus disorder prediction 1264 1306 - -
Lan9g0301 1320 SUPERFAMILY TPR-like 898 997 IPR011990 GO:0005515
Lan9g0301 1320 Pfam Tetratricopeptide repeat 826 852 IPR019734 GO:0005515
Lan9g0301 1320 Pfam DnaJ domain 1171 1254 IPR001623 -
Lan9g0301 1320 Coils Coil 871 891 - -
Lan9g0301 1320 SMART tpr_5 824 857 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 746 779 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 971 1004 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 1025 1058 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 1063 1096 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 790 823 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 1097 1130 IPR019734 GO:0005515
Lan9g0301 1320 SMART tpr_5 914 947 IPR019734 GO:0005515
Lan9g0301 1320 MobiDBLite consensus disorder prediction 1 59 - -
Lan9g0301 1320 SUPERFAMILY TPR-like 746 852 IPR011990 GO:0005515
Lan9g0301 1320 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0301 Lan-Chr9 4058494 4067186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0301 K09527 - gmx:100809278 1369.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0301 9 4058494 4067186 Lan19g0263 19 2888415 2897398 LSH