Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0263 ATGTCGACGCCGGCGGTGCACCTCCGATCTCCGATCAACACCTCCTCCGTCGATTCCACCTCTCACTTCCCCCCTCTTCCTCACCAAGTTCCCTTTCCTCATTTCAACGCCGATAACTTAACCTCTTCCGCCACCGCCGCTACCACCGCACGCACCAGATCAAAACCCCGCCTCACCAAGCTCAGGAAGCAGTCCACGAAGTCCAGGACCAGAACCACCGACTCTGGCTTCAATCCCTTTTGCTCCGATCAGGTAACCGTTAGTGATGATATTTCTCGTAAGTTTGGGGACACAGGTTTTGTGTTCTCTGCTTCTGTTCCTGCTAGGGATTTGAATTCTGAGCAGGAAGAAGCTTCTACAATTGTGAAAGAAACGGAGGTTAGGAAGTGTGGTGGTGTGGAATTTGTGTTTAGTGCTAAACCGAGTGTTAAGGAATCGAATTCACGTGGAAATGAAGCTATAACAGTTTCTGGCGAGGGAGAGGTTAACATTAGGGGTTTTGTTTTTAACGCCAATGGAAGCAACTTGGTTTCGGAAAAGGGAAAATCTAGTGAATTTGTTGAAAACTCAGTTGGGGAGAGTAAAAGTGGGGCTAAAGTCGAGCCAGAAAAGCTGAATTGTTTAAATTTTGTTTTTGGTGACAATCATAGCGGTAAAGCGTCAAAAATTAATGTGGAGAAGCAAGAGTCTATTGGGGGTATGAGATATTCGGATTGTGTAACCGGAACAAATACAGTTGCTCATCAGAATGGTTATTTGGGTAATGATGATATTGGTAAGGTTAAGAGTGCATTTGGAAGTAGTCATGGTAGTCCTACTGCCTATAGTGCCTTTCCTTCGTATAAATTAACTGATGAGATGAAGAAACTGAACATCGACCGTTCTCAGGATGATACCAATAGAGATTCAACGAATGCACATGTGAGTAGTAGCTTTGGATTTGTGTTTGGAGGAAGTGAGAAGGCTTTTGGCGATTTTAATGTTACTTCTGGATCTATATCTAATGATCAAGAGTCTCGCACTAATGCTGCTTCTGAGAATATTGGTGGGAAGCTTTTCAAAAAATGCGAAGCGAACAATGTCCAAAATGAAACTGGTTGTGGTATTGCATATGGTTCTATAGGAACCCCTTGCTCTAAGCCATCCAGTAACAAAGGAAAAATTCCAGTACCTGAAGTTTCACAAGTGAATGGAACTGCAGCACCACTCTCCTCCTCCTCATTTGGTCTGAACTCAATTCAAAATAATTATGCTTCCACCGACCATCCCTTGAATGAAGATCATAATACGCGCAAAGATTGTTTTACAAGTACTCCCGATGCATCAAAGGAGTCTTTTATGGACTTTAAACCCCCAACATGGAGTCCTGATTGTTTTAAAGAGAATTTATTTCCTGAGTTGAATAGAAAATCAGAATCCACACAAAAGGGAAAATCTTGTAAAGAAAAAGGATCAAAATATATGAGGAGAAAATCGAGGCCACATTCCCTGAATAAGAAACCTACAAGGCTGGATCATCTGTCAAAGGAAAACAATTCCCTTGAATCCCCTGATTGTTCTGCTAGTTACTCGCCCATGGATTTTTCTCCCTATCAAGAAACAGGAGCTGATGATCAAGATGTAAAAGCTTCAAAGGATCTGAATGATCTGCACCCTAAGTTTCCCATTGGTTGTGAAGATGAACACTTAGCTGCTGCAAATAGACGAGTAGATACTAATACAGCTGATCAAAGATGTGGAGATCCAGATAATGACAAGTTATTATCACGCAATGGAAGTTCTTCGGTTGGTGATTCTCATTCTTCTGGCCCTGAAATAGTCTTGCCTAGTTTGGAAACACACCAGTTCAGCAGTAGTAGTTTGTCTGGTGCTTCTGCAGATGCTGGGATTGACTTTAGCTCAAACACTGAAAAACAGAAACCTGATCATTTTGTTCATCATCTGGGTGATTCAAAGGAGACAGATTTTGCATTTTCTGCATCAACTGCAGAGGATACTTCTTCATTTAAGGGTAAACAGAAGAAATATAGAAGGAGAAAGGGCCGCGACTCATTTGTTATCTGTCCAAATATGAATGGGAAGTTTGAATCTTCTGTTCAATTTTCACCACTTACTCCTGCCAACATATCATCACAATCTGATGGGATGGATAGATCTCGGATGAATGACCAGATCAAGGAAGGAGGTATTGCATACTCATCTACAATTCATGAAGCCTGTGACAAGTGGAGACTCAGGGGAAACCAAGCATACAAGGACGGGGGTCTTTCTGAAGCTGAGGACTTCTACACACTAGGAATAAATTCTGTCCCCTCAACTGAAAGATCCGGATGTTTGATTAAGCCTCTTCTACTGTGCTATAGCAACCGTGCAGCCACACGCATGAGACTTGGAAGGATTAGAGAAGCTCTGGGGGATTGTGGGTTGGCTATTGCTCTGGACCCCACCTTTCAGAAAGCAAAGATGAGAATTGCTAACTGTCACCTTTTGCTAGGAGAAGTAGAAAATGCTCAGCAGTGTTTTAATAAGTGCATGGAGTCAGGTAGTGTTGTTTGTTTGGATCGGAGAGTCATAGTAGAAGCAGCTGAAGGGTTACATAAGGCTCAGAAAGTGGCTGAGTGTATAAGTAGTGCTGCTGAACTTTTGAAGAAGAGGACTTCTGATGCAGCTGGTACTGCTTTGGAACTACTTACAACGGCATTATCAATAAGTCCATCCTCAGAAAAAATGCTTCAAATGAAAGCAGAGGCTCTATATTTGCTGCAGAAGTATGATGCAGCAATTCAGCTCTGTGAAAGTAGCCAGCATCTTGCAGAAAAGAATTTTGTTTCCTTGCCAAACAGTGGCAGCAGTTCCAATATTTCCATGCGTGATAATTACTCATCTGTTAACTTGTGGAGGTGGTCATTGATATCTAAGTGTTACTTTCATCTTGGAAAGCTCGAGGCATCACTTAAAGTTCTTGAGAAATTACAGCAAGTTGTGTCTGTGAATGACAGATGTGTGATTGGTAACGTTGGAGACCCACTGTCATTAGCTGCTACAATAAGAGAACTTCTGGATCACAAGAATGCAGGAAATGAGAACTTTAAATTGGGAAAGTATAAAGAAGCAGTGGAGAATTACACTGTTGCTTTATCTAGCAATATCAAATCACGCCCTTTTGCAGCAATATGTTTCTGCAACCGTGCTGCTGCTCATCAAGCATTGGGCCAAATTGCTGATTCCATTGCAGACTGCAGTATGGCTATGGCCATCAGTAGAAATTATGCCAAGGCAATTTCAAGAAGAGCCACCTTACATGAAAAGGTTAGAGATTATGAACAGGCAGCTTGTGACCTTAGAAAACTTATATCTGTTTTTGAATCTCAATCCGATGAAAAGGCCAAACCATCTGATTCACCTAGTGGATCAAATGGCGTGAAGGAATCAAGGCAAGCTCATCAACGTCTGCTTTCTGTGGAAGATCAAGCCAAAAAGAAAACCCTCTTGGACTTTTACCTCATCCTAGGAACTAAACCAGCTGATACAGCATCTGATATCAAGAAGGCATATCACAAGGCAGCTCTCAGACATCACCCAGATAAGGCCGGTCAGTGGCTGCCAAGAAGTGAAGTCGGAGATGAAGGTAAAGTATGGAAGGAAATTTCACAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTGCTTTCTGACCCTGCCAAGCGCTCAGAGTACGATCTGGAAGAGGAGATAAAGAAAGCTTCTCAAAGTAGCCAAGGTGGCACATGCAGGAGATCTTCAGATTTTTATAGATATGAAAGATCATCTGATGGTTATAAATCTCCCTCTGACAAAACTTCAAGCAGACGGTATTATGGACGAGATCAATGGAAGACATATGGAAATTCATATTCTCGATGGTAA 3930 0.4216 MSTPAVHLRSPINTSSVDSTSHFPPLPHQVPFPHFNADNLTSSATAATTARTRSKPRLTKLRKQSTKSRTRTTDSGFNPFCSDQVTVSDDISRKFGDTGFVFSASVPARDLNSEQEEASTIVKETEVRKCGGVEFVFSAKPSVKESNSRGNEAITVSGEGEVNIRGFVFNANGSNLVSEKGKSSEFVENSVGESKSGAKVEPEKLNCLNFVFGDNHSGKASKINVEKQESIGGMRYSDCVTGTNTVAHQNGYLGNDDIGKVKSAFGSSHGSPTAYSAFPSYKLTDEMKKLNIDRSQDDTNRDSTNAHVSSSFGFVFGGSEKAFGDFNVTSGSISNDQESRTNAASENIGGKLFKKCEANNVQNETGCGIAYGSIGTPCSKPSSNKGKIPVPEVSQVNGTAAPLSSSSFGLNSIQNNYASTDHPLNEDHNTRKDCFTSTPDASKESFMDFKPPTWSPDCFKENLFPELNRKSESTQKGKSCKEKGSKYMRRKSRPHSLNKKPTRLDHLSKENNSLESPDCSASYSPMDFSPYQETGADDQDVKASKDLNDLHPKFPIGCEDEHLAAANRRVDTNTADQRCGDPDNDKLLSRNGSSSVGDSHSSGPEIVLPSLETHQFSSSSLSGASADAGIDFSSNTEKQKPDHFVHHLGDSKETDFAFSASTAEDTSSFKGKQKKYRRRKGRDSFVICPNMNGKFESSVQFSPLTPANISSQSDGMDRSRMNDQIKEGGIAYSSTIHEACDKWRLRGNQAYKDGGLSEAEDFYTLGINSVPSTERSGCLIKPLLLCYSNRAATRMRLGRIREALGDCGLAIALDPTFQKAKMRIANCHLLLGEVENAQQCFNKCMESGSVVCLDRRVIVEAAEGLHKAQKVAECISSAAELLKKRTSDAAGTALELLTTALSISPSSEKMLQMKAEALYLLQKYDAAIQLCESSQHLAEKNFVSLPNSGSSSNISMRDNYSSVNLWRWSLISKCYFHLGKLEASLKVLEKLQQVVSVNDRCVIGNVGDPLSLAATIRELLDHKNAGNENFKLGKYKEAVENYTVALSSNIKSRPFAAICFCNRAAAHQALGQIADSIADCSMAMAISRNYAKAISRRATLHEKVRDYEQAACDLRKLISVFESQSDEKAKPSDSPSGSNGVKESRQAHQRLLSVEDQAKKKTLLDFYLILGTKPADTASDIKKAYHKAALRHHPDKAGQWLPRSEVGDEGKVWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRSEYDLEEEIKKASQSSQGGTCRRSSDFYRYERSSDGYKSPSDKTSSRRYYGRDQWKTYGNSYSRW* 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0263 1309 MobiDBLite consensus disorder prediction 1269 1294 - -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 1130 1146 - -
Lan19g0263 1309 Gene3D Tetratricopeptide repeat domain 864 1000 IPR011990 GO:0005515
Lan19g0263 1309 Gene3D DnaJ domain 1152 1269 IPR036869 -
Lan19g0263 1309 SUPERFAMILY TPR-like 892 993 IPR011990 GO:0005515
Lan19g0263 1309 MobiDBLite consensus disorder prediction 498 512 - -
Lan19g0263 1309 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1309 - -
Lan19g0263 1309 Gene3D Tetratricopeptide repeat domain 1018 1134 IPR011990 GO:0005515
Lan19g0263 1309 Gene3D Tetratricopeptide repeat domain 738 853 IPR011990 GO:0005515
Lan19g0263 1309 MobiDBLite consensus disorder prediction 513 529 - -
Lan19g0263 1309 Pfam DnaJ domain 1165 1248 IPR001623 -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 1253 1294 - -
Lan19g0263 1309 SUPERFAMILY TPR-like 1022 1121 IPR011990 GO:0005515
Lan19g0263 1309 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1309 - -
Lan19g0263 1309 ProSitePatterns Nt-dnaJ domain signature. 1228 1247 IPR018253 -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 1 22 - -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 37 75 - -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 587 606 - -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 483 497 - -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 1125 1148 - -
Lan19g0263 1309 Pfam Tetratricopeptide repeat 820 846 IPR019734 GO:0005515
Lan19g0263 1309 MobiDBLite consensus disorder prediction 469 539 - -
Lan19g0263 1309 CDD DnaJ 1165 1240 IPR001623 -
Lan19g0263 1309 MobiDBLite consensus disorder prediction 37 54 - -
Lan19g0263 1309 PRINTS DnaJ domain signature 1167 1185 IPR001623 -
Lan19g0263 1309 PRINTS DnaJ domain signature 1185 1200 IPR001623 -
Lan19g0263 1309 PRINTS DnaJ domain signature 1223 1243 IPR001623 -
Lan19g0263 1309 SUPERFAMILY TPR-like 741 846 IPR011990 GO:0005515
Lan19g0263 1309 MobiDBLite consensus disorder prediction 573 606 - -
Lan19g0263 1309 ProSiteProfiles dnaJ domain profile. 1165 1251 IPR001623 -
Lan19g0263 1309 SMART tpr_5 784 817 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 1057 1090 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 740 773 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 908 941 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 818 851 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 1091 1124 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 965 998 IPR019734 GO:0005515
Lan19g0263 1309 SMART tpr_5 1019 1052 IPR019734 GO:0005515
Lan19g0263 1309 SMART dnaj_3 1164 1243 IPR001623 -
Lan19g0263 1309 SUPERFAMILY Chaperone J-domain 1138 1247 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0263 Lan-Chr19 2888415 2897398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0263 K09527 - gmx:100809278 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0301 9 4058494 4067186 Lan19g0263 19 2888415 2897398 LSH