Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1940 ATGTCGTTTCCGAACGAAAACCCTAACCCTAGTTTGAAGATGGAGTCGGAGGAGAGATCGGCGAGGTGGTCAAATCTGTCAGTGAATGAGAACAAAGCCATGAATGAGATGCTTCTCGCCATGAAGCTCAATTCTCTCCCTTCTTCCCCCAGGTCTGGGAAAACCCTAATCCCCAATCTCTCTATCATCGATCGGACTCTTCTCTTATCCGACGAGCTTCTTCTCAGGATCCTCTCCAAACTCCCTCATTCCCAGACTAACTACAATTCCCTTGTTTGCAAGCGCTGGCTCTATCTCCAGGGTCGACTACTTCGTTCAATTAGGGTTTTCGATTGGAACTTTCTCTTATCCGGAAGGTTGATTCATCGCTTCCCTAACCTCAATCACGTTGATTTGATATATGGCTGCTTGATTTCGCCCCCAAGTTCCGGTATTTTCTTGAGCAACCGTGTCATTTCGATGCACGTTGATTCCGCATGTTCATCAGGTTGGTGTTTTTGTGAGGATAACATGTTGCCCGTTGAAGTCATTGATAGTGGCCTCAGTGCCCTTGCTAGTGGATGCCCTAATTTACGCCGCCTTCATGTGATCGGGGCTAGTGAGATGGGGCTCTTGAGTGTGGCTGAGGAGTGTTCCACTTTGCAGGAATTGGAATTGCAGAAGTGCAGTGACAATGTGCTTCGCGGGATTGCCGCCTGCACTAATTTGCAGATCTTAAAGTTGGTTGGGAATGTCGATGGGTTTTACAATTCGGTTGTTTCTGATATCGGTTTAACAATTTTGGCTCAGGGCTGTAAGAGGTTGGTGAAGCTTGAGCTATGTGGTTGTGAAGGGAGCTTCGACGGGATTAAAGCTATTGGGAAGTGTTGTCAGATGTTGGAGGAGTTGACTTTTTGCGATCATAGGATGGATGATGGGTGGTTGGCTGCACTTTCATATTGCGAGAATTTGAAGACCTTGAAGTTCCAGTCGTGTAAAAGAATTGATTCGAATCTGGGACTTGAGGAATATTTGGGTTCTTGTCCCTCACTTGAACGGCTGCATTTGCAGAAATGCCAGTTGCGCGATAAGAAAATTGCGGCCGCTATGTTTTCCGTGTGCAGGACTGTCAGGGAGATCATTATTCATGACTGTTGGGGACTGGATAACAACATTTTCAGTTTTGCAATTGTTTGCAGGCGGGTAAAAATGTTATACTTAGAAGGATGCTCATTGCTAACAACAGAAAGTTTAGAGTCAGTAATTCATTCATGGAATGAGCTTCAGAGCCTTAGGGTGGTCTCATGTAAGAACATAAAGGACAGTGAAATCTCTCCTGCGCTCGCCACCTTAGTTACCACTCTCCAAGATTTGACATGGAGGCCAGATACCAAATCACTTCTCCCATCAAGTCTTGTGGGGATTGGCATTGGAAACAAAGGTGGTAAATTTTTCAAAAAGACATGA 1446 0.4544 MSFPNENPNPSLKMESEERSARWSNLSVNENKAMNEMLLAMKLNSLPSSPRSGKTLIPNLSIIDRTLLLSDELLLRILSKLPHSQTNYNSLVCKRWLYLQGRLLRSIRVFDWNFLLSGRLIHRFPNLNHVDLIYGCLISPPSSGIFLSNRVISMHVDSACSSGWCFCEDNMLPVEVIDSGLSALASGCPNLRRLHVIGASEMGLLSVAEECSTLQELELQKCSDNVLRGIAACTNLQILKLVGNVDGFYNSVVSDIGLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSYCENLKTLKFQSCKRIDSNLGLEEYLGSCPSLERLHLQKCQLRDKKIAAAMFSVCRTVREIIIHDCWGLDNNIFSFAIVCRRVKMLYLEGCSLLTTESLESVIHSWNELQSLRVVSCKNIKDSEISPALATLVTTLQDLTWRPDTKSLLPSSLVGIGIGNKGGKFFKKT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1940 481 SUPERFAMILY F-box domain 62 117 IPR036047 GO:0005515
Lan8g1940 481 Gene3D Ribonuclease Inhibitor 279 459 IPR032675 -
Lan8g1940 481 SUPERFAMILY RNI-like 251 441 - -
Lan8g1940 481 MobiDBLite consensus disorder prediction 1 20 - -
Lan8g1940 481 PANTHER UNCHARACTERIZED 46 462 - -
Lan8g1940 481 Gene3D Ribonuclease Inhibitor 167 255 IPR032675 -
Lan8g1940 481 SUPERFAMILY RNI-like 104 244 - -
Lan8g1940 481 Gene3D - 66 102 - -
Lan8g1940 481 PANTHER F-BOX PLANT-LIKE PROTEIN 46 462 - -
Lan8g1940 481 SMART LRR_CC_2 188 213 IPR006553 -
Lan8g1940 481 SMART LRR_CC_2 392 417 IPR006553 -
Lan8g1940 481 SMART LRR_CC_2 341 369 IPR006553 -
Lan8g1940 481 SMART LRR_CC_2 233 264 IPR006553 -
Lan8g1940 481 SMART LRR_CC_2 265 289 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1940 Lan-Chr8 25398077 25400875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1940 K10268 - gmx:100812193 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1940 8 25398077 25400875 Lan13g0035 13 176973 179731 LSH