Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0035 ATGTCGTTTCCTTGTGAGAATCGGAAGAAGAGAGCGGCAAGGTGGTCAGATATATGGCTGAACCACACCAAACCACTGAATCAAATGTTTGTCTCAATGAACCTCGATTCTCTCTCCTCTTCCCCCAAATCAGGAAAAACCCTAATCCCCTTTTTCTCAATCATCGACCCCACGCTTCTGCTATCCGATGAGCTTCTTCTCAGAATCCTCTCCAAGCTTCCCGATTCTCAGACCAACTCCAATTCCCTCGTTTGCAAGCGCTGGCTCAATCTCCAGGGTCGACTCATTCGTTCAATTAGGATTTTGGATTGGAACTTTCTCTTATCAGGCAGGTTCATTCATCGCTTCCCCAATCTCAATCACGTTGATTTGATCTCTGGGTCTTTCATTTCCCCGCCAAGTTCGCCTATTTTCTTGACTCACCGTGTAATTTCGATGCATCTTGATTCTGCGTGTTTATCAAATTGGTGTTTTTGTGAGGATAACATGTTGCCTGTTGAGGTCATTGATAATGGCCTCAATGTGCTTGCTAGTGGGTGCCCCAATTTGCGCCGGCTTCACGTGATCGGCGCTAGTGAGATGGGCCTGTTGAGTGTGGCTGAGGAGTGTTCTACTCTGCAGGAACTGGAATTGCAAAAGTGTAGTGACAAGGTGCTTTCTGGGATTGCCGCGTGTACCAATCTTCAGATCTTGAAGTTGGTTGGGAATGTCCAAGGGTTTTATAATTCGGTTGTGTCTGATATCGGTTTGACGATTTTGGCTCAGGGTTGTAAGAGGTTGGTGAAGCTTGAGCTATGTGGTTGTGAAGGGAGCTTTGATGGGATTAAAGCCATTGGGAAGTGTTGTCAAATGTTGGAAGAGTTGACTTTTTGTGATCATAGGATGGATGATGGTTGGATGGCCGCACTTTCTTATTGCGAGAATTTGAAGACCTTGAGGTTCCAGTCCTGTAAAACAATCGACTCAAACCCTGGATTGGATGAGTATTTGGGTTCTTGTCCCGCGCTTGAACGGCTGCATTTGCAGAAGTGCCAGTTGCGGGATAAGAAGAGCACCGCAGCTATGTTTTCTGTCTGCAGGGCTGCCCGGGAGATTATTATTCATGACTGTTGGGGATTGGATAATAGCATTTTCAGCTTTGCAATTATTTGCAGGCGGGTAAAGAGGTTATACTTAGAAGGATGCTCATTGCTAACAACTGAAGGTTTAGAGTTAGTAATTCACTCATGGAAGGAGCTTCAGAGCCTTAGAGTAGTCTCATGTAAGAACATAAAGGATAGTGAAATCTCTCCTGAACTCGGGACCTTATTTACCACTCTCCAAGATTTAACATGGAGGCCAGATACAAAATCACTTCTTCCATCAAGTCTTGTGGAGATTGGCATTGGAAAGAAAGGTGGTAAATTTTTCAAAAGGACATGA 1422 0.448 MSFPCENRKKRAARWSDIWLNHTKPLNQMFVSMNLDSLSSSPKSGKTLIPFFSIIDPTLLLSDELLLRILSKLPDSQTNSNSLVCKRWLNLQGRLIRSIRILDWNFLLSGRFIHRFPNLNHVDLISGSFISPPSSPIFLTHRVISMHLDSACLSNWCFCEDNMLPVEVIDNGLNVLASGCPNLRRLHVIGASEMGLLSVAEECSTLQELELQKCSDKVLSGIAACTNLQILKLVGNVQGFYNSVVSDIGLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWMAALSYCENLKTLRFQSCKTIDSNPGLDEYLGSCPALERLHLQKCQLRDKKSTAAMFSVCRAAREIIIHDCWGLDNSIFSFAIICRRVKRLYLEGCSLLTTEGLELVIHSWKELQSLRVVSCKNIKDSEISPELGTLFTTLQDLTWRPDTKSLLPSSLVEIGIGKKGGKFFKRT* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0035 473 SUPERFAMILY RNI-like 242 443 - -
Lan13g0035 473 Gene3D Ribonuclease Inhibitor 57 272 IPR032675 -
Lan13g0035 473 Gene3D Ribonuclease Inhibitor 273 460 IPR032675 -
Lan13g0035 473 SUPERFAMILY RNI-like 87 322 - -
Lan13g0035 473 PANTHER UNCHARACTERIZED 38 454 - -
Lan13g0035 473 SMART LRR_CC_2 384 409 IPR006553 -
Lan13g0035 473 SMART LRR_CC_2 257 281 IPR006553 -
Lan13g0035 473 SMART LRR_CC_2 180 205 IPR006553 -
Lan13g0035 473 SMART LRR_CC_2 333 361 IPR006553 -
Lan13g0035 473 SMART LRR_CC_2 225 256 IPR006553 -
Lan13g0035 473 PANTHER F-BOX PLANT-LIKE PROTEIN 38 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0035 Lan-Chr13 176973 179731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0035 K10268 - gmx:100812193 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1940 8 25398077 25400875 Lan13g0035 13 176973 179731 LSH