Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1894 ATGAGTAGCGGCGCAGGGACGGTGGTGTGTGTGACCGGAGCTACCGGTTATATAGCTTCATGCCTCATCAATTTTCTCCTTCTCCGTCGTTACACTGTCAGAGCCACCGTTCGTGATCCAAACAATCTCAAAAAGGTTCAACACTTGCTTAAACTTGATGGTGCAAATGAAAGGTTGCAACTTTATAAAGCAGATCTTCTTCTAGAAGGTTCCTTTGACTCTGTTATTCATGGTTGTCATGGTGTTTTTCACACTGCTTCACCTGTTCCTGCTTCCAATGTTCAAGACCCACAGGCTGAATTAATTGATCCAGCATTGAAGGGAACTCTTAATGTTCTTAAATCATGTGCAAAATCGCCATCTGTGAAACGAGTTGTCTTAACATCTTCTATGTGTGCGGTTTTGTACAATGGAAGGCCTCATAGTCCTGAAGTAGTAGTTGATGAAACATGGTTTTCGGATACAGAATTTTGTAGGGAATTGAAGTATTTTTATTCGATTTCAAAGACATTGGCTGAGGATGCTGCCTGGAAATTTGCAAAGGAAAACGACATTGACATGGTTTCTATTAACCCAACAATGGTGGAAGGACCTTTCCTACAATCGGAGCTTAACACTAGCGTTTATCGTATTTTAAGCCTAGTAAATGGTGCCCAAACTTTTCCCAATGCTTCTTCTGGGTGGGTCAATGTGAAAGATGTTGCAGAAGCCCATATTAAAGCATATGAGATTCCTTCAGCTAGCGGTAGATACTGTTTGGTTGAGAGAGTGGCACATTACGCAGAGATCGTGAAGATTTTACGTGATCTGTACCCAACAATACAACTTCCAGATAAGTGTGCAGATGATAAGCCATATATGCCAATATATCAAGTTTCCAAAGAAAAGGCAAAGAGCTTGGGAATTGAATTTACTCCTTTAGAAGTGACCCTCAAAGAGACTGTGGAATGCTTGAAAGAGAAGAACTTTATTAGTTTCTAA 981 0.4067 MSSGAGTVVCVTGATGYIASCLINFLLLRRYTVRATVRDPNNLKKVQHLLKLDGANERLQLYKADLLLEGSFDSVIHGCHGVFHTASPVPASNVQDPQAELIDPALKGTLNVLKSCAKSPSVKRVVLTSSMCAVLYNGRPHSPEVVVDETWFSDTEFCRELKYFYSISKTLAEDAAWKFAKENDIDMVSINPTMVEGPFLQSELNTSVYRILSLVNGAQTFPNASSGWVNVKDVAEAHIKAYEIPSASGRYCLVERVAHYAEIVKILRDLYPTIQLPDKCADDKPYMPIYQVSKEKAKSLGIEFTPLEVTLKETVECLKEKNFISF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1894 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 319 IPR036291 -
Lan8g1894 326 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 322 - -
Lan8g1894 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 322 - -
Lan8g1894 326 CDD FR_SDR_e 9 301 - -
Lan8g1894 326 Gene3D - 7 326 - -
Lan8g1894 326 Pfam NAD dependent epimerase/dehydratase family 9 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1894 Lan-Chr8 25147857 25150297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1894 2 326 Miscellaneous Gene Families AT5G19440 67.692 1.08e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1894 - - jre:109005322 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1894 8 25147857 25150297 Lan13g0102 13 602960 605752 LSH