Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0102 ATGAGCATCTATGAAGGAAAGTTGGTGTGTGTAACAGGTGCTTCTGGTTATATAGCTTCATGGATTGTCAAGTTTCTTCTTCAACGTGGTTACACTGTTAGGGCCACAGTTCGTGACCCAAGCAATCTCAAAAAGATAGAGCATTTGGTTAATCTTGATGGTGCAAATGAAAGGTTGCACCTTTTTAAGGCAGATCTGTTGGAACAAGGTTCCTTTGACTCTGCTATTGAGGGATGTCATGGTGTTTTTCATACTGCTTCACCTGTTATTGCTGCTGCAAATGTCCAAGATCCACAGGTTGAATTAATTGATCCAGCAGTGAAGGGAACTCTTAATGTTCTTAAATCCTGTGTAAAATCGCCATCTGTGAAGCGAGTTATTTTAACATCTTCTATGGCTGCTGTTCTACATAATGGAAGGTCTCGAACTCCCGATGTAATCATTGATGAGACATGGTTTTCAAATCTAGATATCTGTAGGGAACTAAAGAGTTGGTATGCATTTGGAAAGACTTCGGCAGAAGATGTTGCAAGGAAGTATCTAAAGGAAAACAACATTGACATGGTTGCTATTAACCCATCAATGACAGTAGGACCTCTCTTGCAACATGAGCTTAATGCAAGTGCTGCTTTAATTTTCAACCTTATAAATGGTTCAGAAACATTTCCAAATGCAAGTTATCCATGGATCAATGTGAAAGATGTTGCAGATGCTCATATTCAGGCATATGAGATTGGCTCAGCTAGTGGAAGATATATTTTGGCTGAGAGAGTGACACACTTCTCTGAAGTTGTTAAGATTTTACGCGATATTTACCCGACATTACAAATTGCAGAGAAGTGTGAAGATGATAAGCCTTTCATGCCAACATATCAGGTTTCCAAAGAAAAGGCAAAGGGCTTAGGAATTGAATTTATTCCATTTGATGTGACCATTCAGGAGACTGTGGAAAGCTTCAAAGAAAAGAAACTACTGAAACAGTTCTAG 987 0.3901 MSIYEGKLVCVTGASGYIASWIVKFLLQRGYTVRATVRDPSNLKKIEHLVNLDGANERLHLFKADLLEQGSFDSAIEGCHGVFHTASPVIAAANVQDPQVELIDPAVKGTLNVLKSCVKSPSVKRVILTSSMAAVLHNGRSRTPDVIIDETWFSNLDICRELKSWYAFGKTSAEDVARKYLKENNIDMVAINPSMTVGPLLQHELNASAALIFNLINGSETFPNASYPWINVKDVADAHIQAYEIGSASGRYILAERVTHFSEVVKILRDIYPTLQIAEKCEDDKPFMPTYQVSKEKAKGLGIEFIPFDVTIQETVESFKEKKLLKQF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0102 328 CDD FR_SDR_e 9 302 - -
Lan13g0102 328 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 5 325 - -
Lan13g0102 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 325 - -
Lan13g0102 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 320 IPR036291 -
Lan13g0102 328 Gene3D - 7 327 - -
Lan13g0102 328 Pfam NAD dependent epimerase/dehydratase family 9 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0102 Lan-Chr13 602960 605752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0102 5 322 Miscellaneous Gene Families AT5G19440 67.925 1.44e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0102 - - gmx:100804704 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1894 8 25147857 25150297 Lan13g0102 13 602960 605752 LSH