Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1877 ATGCTTGCCCCTTTCACACCTGGGAAGAAGACTAATCCTGTGATTATAGACAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAATATCTTGACGCACTTGCTGGCCTATGGTGCACTAGTTTAGGAGGAAGTGAATCTCGCCTTATTGAAGCAGCCACTGCACAATTAAAGAAGTTGCCATTTTATCATTCCTTTTTTAACAGGACTGCCGAACCTTCTTTGGTTCTAGCCAAGGATCTCATAGAAATTTTCACAGCTAGAAAAATGGGAAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACAGTGTGGTCAAAATTGTATGGTATTACAACAATGCACTTGGACGACCAAATAAGAAGAAGTTTATAGCTCGTGAAAAATCGTATCATGGTACAACAATGACAGCAGCTAGTCTTTCTGGTCTTCCAACTTTACATCAACAGTTTGATCTGCCACTTCCATTTGTCTTGTACACTGATTGTCCACATTACTGGCGTTATCATCTTCCAGGTGAAACAGAAGAAGAGTATTCAACAAGATTAGCCAACAATCTGGAGGAGCTGATTCTAAAAGAGGGACCAGACACAATTGCTGCATTTATTGCTGAACCAGTAATAGGGGCAGGTGGTGTGATACCTCCACCTTCAACTTATTTTGAAAAGATCCAAGCCGTTCTCAACAAGTATGACATTCTTTTTGTTGCCGATGAGGTAATCTGTGGCTTTGGAAGACTTGGAACAATGTTTGGGTGTGACAAGTACAACATCAAGCCAGATCTTGTTTCCTTAGCTAAGGCACTTTCTTCTGGATATTTGCCAATTGGAGCCGTTCTTGTGAGCCCAGAAATTACCGAAGTTATAGACTCACAAAGCAACGAAATTGGTTCATTTTCTCACGGCTTTACTTATTCTGGACATCCAGTATCATGTGCTCTTGCAATTGAAACACTCAAGATCTACAAGGAAATAAATATTGTGGACAAAGTGAGCAAAATTTCACCAAAGTTCCAAGATGGCCTAAAAGCATTTTCTGACAGTCCTATAATTGGAGAGATACGAGGAACCGGCTTGATTCTAGGGCTTGAGTTTGCAAAAAATAAGTCACCTAATGATCCATTCCCTCGTGAATGGGGGGTAGGTGCCTATTTTGCAGCACATTGTGACAAGAATGGGCTGATTGTTCGTTCGGCTGGAGATCTGATCATGCTTTGTCCACCATTAATTATTTCCTCAGAAGAAGTTGATGAGTTAATCAGCATTTGTGGGGAAGCACTAAAAGCTACAGAAGAGAGGGTGCAAGAGCTCAAGTCTCAGCTTAACTAG 1338 0.4081 MLAPFTPGKKTNPVIIDKSEGSYVYDINGKKYLDALAGLWCTSLGGSESRLIEAATAQLKKLPFYHSFFNRTAEPSLVLAKDLIEIFTARKMGKAFFVNSGSEANDSVVKIVWYYNNALGRPNKKKFIAREKSYHGTTMTAASLSGLPTLHQQFDLPLPFVLYTDCPHYWRYHLPGETEEEYSTRLANNLEELILKEGPDTIAAFIAEPVIGAGGVIPPPSTYFEKIQAVLNKYDILFVADEVICGFGRLGTMFGCDKYNIKPDLVSLAKALSSGYLPIGAVLVSPEITEVIDSQSNEIGSFSHGFTYSGHPVSCALAIETLKIYKEINIVDKVSKISPKFQDGLKAFSDSPIIGEIRGTGLILGLEFAKNKSPNDPFPREWGVGAYFAAHCDKNGLIVRSAGDLIMLCPPLIISSEEVDELISICGEALKATEERVQELKSQLN* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1877 445 Gene3D Aspartate Aminotransferase, domain 1 14 430 IPR015422 GO:0003824
Lan8g1877 445 SUPERFAMILY PLP-dependent transferases 11 431 IPR015424 -
Lan8g1877 445 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 1 440 - -
Lan8g1877 445 CDD OAT_like 1 430 IPR005814 GO:0008483|GO:0030170
Lan8g1877 445 Coils Coil 430 445 - -
Lan8g1877 445 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 1 440 - -
Lan8g1877 445 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 IPR005814 GO:0008483|GO:0030170
Lan8g1877 445 Gene3D - 48 330 IPR015421 GO:0003824
Lan8g1877 445 PIRSF Transaminase_4ab_Lys_Orn 12 433 IPR005814 GO:0008483|GO:0030170
Lan8g1877 445 Pfam Aminotransferase class-III 10 429 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1877 Lan-Chr8 25019724 25023984 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1877 K16871 - gmx:100815181 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1877 8 25019724 25023984 Lan13g0115 13 675927 683870 LSH