Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0115 ATGAACAAGCTTCTTCGATCCACACTCAGAACACAGGCTGCTGCAGTTTTCAGAAATTCTCAGGAAAATCTTCTTCAGGTTCCATTATGTACCAGATCATATAATGCAGAATCTTCTTTGGAAAAAGACACTTCAACAGCGGATTTGAATGCTAGTGAAAGGTTCAGGAGTCATGGTATGCTTGCCCCTTTCACAGCTGGGTGGCAGACTACGGATCTGAATCCTTTGGTTATAGACAAGTCAGAGGGGAGCTATGTATATGACATCAATGGGAAGAAATATCTTGACTCACTTGCTGGTCTATGGTGCACTGCTTTAGGAGGAAATGAGCCACGCCTAGTTGAAGCTGCCATTACACAATTAAAGAAGTTGCCATTTTACCATTCCTTCTGGAACCGGACCACCAAACCTTCCTTGGATTTAGCCAAGGATCTCCTAGAAACTTTCACAGCCAGAAAAATGGCAAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACAGTCAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGACGACCAAATAAGAAGAAGTTTATAGCACGTGCTAAATCGTACCATGGTTCAACATTGATAGCAGCTAGTCTTTCCGGCCTTCCAGCTTTACATCAAAAGTTTGATCTGCCTGCTCCATTTGTCTTGCACACTGACTGCCCACATTACTGGCGGTATCATCTTCCAGGCGAGACAGAGGAAGAGTTTTCAACAAGATTAGCCAACAATTTGGAGGAGCTGATTCTGAAAGAGGGACCAGATACAATTGCTGCATTTATTGCTGAACCAGTGATGGGGGCAGGTGGTGTGATAACTCCACCTTCAACTTACTTCGAAAAGATCCAGGCCGTTGTTAAGAAGTATGACATTCTGTTTATCGCGGATGAGGTAATCTGTGCCTTTGGAAGGCTTGGGACAATGTATGGATGTGACAAGTACAACATCAAGCCAGACCTTGTCTCTGTAGCTAAGGCACTTTCTTCTGGATATTTGCCAATTGGAGCAGTTCTTGTGAGCCCAGAAATTTCAGAAGTTATACACTCGCAAAGCAACAAACTTGGTTCATTTTCTCATGGGTTTACTTATTCTGGACACCCCGTATCCTGTGCTGTCGCAATTGAAACTCTCAAGATTTACAAGGAAAGAAATATTTTGGACAAAGTGAGGAAAATTTCCCCAAAGTTCCAAGATGGCATAAAAGCATTTTCTGACAGTCCTATCATCGGAGAGATACGAGGAACCGGCTTGATCCTGGGGACTGAGTTTACAGACAACAAGTCACCAAATGATCCATTCCCTCCTGAATGGGGGATAGGCGCCTATTTTGGAGCACAATGTGAGAAGCGCGGGATGTTAGTTCGCGTGGCTGGAGATAACATCATGATGTGTCCACCATTTATTATTTCCCCAGAAGAAATTGATGAGTTAATCAGCATTTATGGGAAGGCACTAAAAGCTACAGAAGAGAGGGTGAATGAGCTCAAGTCTCAGAAGAAGTAG 1524 0.4304 MNKLLRSTLRTQAAAVFRNSQENLLQVPLCTRSYNAESSLEKDTSTADLNASERFRSHGMLAPFTAGWQTTDLNPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALGGNEPRLVEAAITQLKKLPFYHSFWNRTTKPSLDLAKDLLETFTARKMAKAFFVNSGSEANDSQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEELILKEGPDTIAAFIAEPVMGAGGVITPPSTYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYNIKPDLVSVAKALSSGYLPIGAVLVSPEISEVIHSQSNKLGSFSHGFTYSGHPVSCAVAIETLKIYKERNILDKVRKISPKFQDGIKAFSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGIGAYFGAQCEKRGMLVRVAGDNIMMCPPFIISPEEIDELISIYGKALKATEERVNELKSQKK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0115 507 SUPERFAMILY PLP-dependent transferases 59 493 IPR015424 -
Lan13g0115 507 Gene3D Aspartate Aminotransferase, domain 1 76 492 IPR015422 GO:0003824
Lan13g0115 507 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 19 502 - -
Lan13g0115 507 CDD OAT_like 70 492 IPR005814 GO:0008483|GO:0030170
Lan13g0115 507 Gene3D - 110 392 IPR015421 GO:0003824
Lan13g0115 507 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 19 502 - -
Lan13g0115 507 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 300 337 IPR005814 GO:0008483|GO:0030170
Lan13g0115 507 Coils Coil 485 505 - -
Lan13g0115 507 Pfam Aminotransferase class-III 75 491 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0115 Lan-Chr13 675927 683870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0115 K16871 - gmx:100792355 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1877 8 25019724 25023984 Lan13g0115 13 675927 683870 LSH