Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1870 ATGGCTTCCTTCAATCACTTTTCGATTTTCTCTCTCGCTCTTCTCCTTCTCGCTTCTCCTCTTTTACAAGTTGCTAGGTGCCAGTCGGAATCAGATGAAGCAGCGCAAACCACTGAAGAAGCAAGTGATATCGGTGTTGTTGGTGACGATGTCCAAGATTTCGGCGATGAGACCTTCGATTCAGCTCCAGGAATAGATACAATCACTTTGTTTCCAAAAAACAGCGCAAAATTGGTAACAGCTGGAGAGGAGACAGAGCTGCTTATCGGTGTAAAAAATGATGGGGAGTCAAGCTTGAAAGTTATTGCAATTAAGGCTAGTGTTCACCTTGCCGTTGATCATCGCATACTTGTTCAAAATCTTACTACTCAGGTTTTCAACAATGGTAAAGTTCCAGCTACAGCACAGGCTACTTTCTCATATTTATTTGCTGTCAGCAAGTTCTTGCAGCCTGGAAATTTTGATCTTGTTGGCACCGTTGTGTATGAGATAGATCAGCATCCATACCAAAGTACTTTCTATAATGGCACAATTGAAGTTGTTGAGGCTGGTGCTTTTCTCAGCATAGAATCTGTTTTCCTTGTTACTCTCGGAGCTTCTCTCCTTGCTCTCCTTGGGATATGGATTCATGGTCAAATACAAAACTTATCCAAGAAAACAAAGAGGGCTCCTAAAGTTGAAGTTGGGACTAGGAGTACAGATGCGTCCATCGATGAGTGGCTCCAGGGAACTGCATATACTCAGTCTCAGGCTAACAAATCAAAGAAGAAGAAGTAG 777 0.426 MASFNHFSIFSLALLLLASPLLQVARCQSESDEAAQTTEEASDIGVVGDDVQDFGDETFDSAPGIDTITLFPKNSAKLVTAGEETELLIGVKNDGESSLKVIAIKASVHLAVDHRILVQNLTTQVFNNGKVPATAQATFSYLFAVSKFLQPGNFDLVGTVVYEIDQHPYQSTFYNGTIEVVEAGAFLSIESVFLVTLGASLLALLGIWIHGQIQNLSKKTKRAPKVEVGTRSTDASIDEWLQGTAYTQSQANKSKKKK* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1870 258 Pfam Translocon-associated protein (TRAP), alpha subunit 27 245 IPR005595 GO:0005789
Lan8g1870 258 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 5 258 - -
Lan8g1870 258 PANTHER - 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1870 Lan-Chr8 24971298 24974890 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1870 K13249 - gmx:100820543 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0071 7 356552 359836 Lan8g1870 8 24971298 24974890 LSH
Lan8g1870 8 24971298 24974890 Lan13g0131 13 767098 770823 LSH