Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0131 ATGGCTTCCTTCAATCACTTTTGCTTTTTCTCTCTCTCTCTTCTTCTTCTTCTTCTTCTTGCTTCCCCTCTCCTTCAAGTTGCTAGGTGCCAGACAGAGTCAGATGAAACTGTGCAGGCAACTGAAGAAGCAAGTGATATCGGCATTGTTGATGACGATGCCCAGGATTTTGGTGATGAGAGCTTCCCTACTGCTCCAGGGATCGAAACAGTTTCTGTGTTTCCAAAAAATAGTGCAAGATTGGTAACAGCTGGAGAGGACACAGAGCTGCTTGTTGGTGTAAAAAATGACGGGGAGTCGAGCTTGAAAGTTATTGCAATTAAGGCTAGTATTCACCTTGCTTATGATCATCGTCTGCTTGTCCAGAATCTCACCACTCAGGTTTTCAACACCGGTAAAGTCCCAGCCTCAGCACAGGCTACTTTCCCATATTTATTTGCCGTGAGCAAGTTCTTGCAGCCTGGAAATTTTGATCTTGTGGGCACCATTGTGTACGAGATAGATCATAATCCTTACCAGAGTACTTTCTATAATGGCACAATTGAAGTTGTTGAGGCTGGTAATTTCCTCAGCATAGAATCCGTTTTTCTTGTTACACTTGGAATTGCCCTCCTCGCACTCCTCGGGATATGGATTCATGGTCAAATCCAAAACCTATCGAAGAAAACAAAGAGAGCTCCTAAAGTTGAAGTCGGGACTAGGAGTACAGATGCGTCCTTGGACGAGTGGCTCCAGGGAACTGCATATACTCAGTCTCAGGCAAACAAATCAAAGAAGAAGAAGTAG 786 0.4427 MASFNHFCFFSLSLLLLLLLASPLLQVARCQTESDETVQATEEASDIGIVDDDAQDFGDESFPTAPGIETVSVFPKNSARLVTAGEDTELLVGVKNDGESSLKVIAIKASIHLAYDHRLLVQNLTTQVFNTGKVPASAQATFPYLFAVSKFLQPGNFDLVGTIVYEIDHNPYQSTFYNGTIEVVEAGNFLSIESVFLVTLGIALLALLGIWIHGQIQNLSKKTKRAPKVEVGTRSTDASLDEWLQGTAYTQSQANKSKKKK* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0131 261 PANTHER - 11 261 - -
Lan13g0131 261 Pfam Translocon-associated protein (TRAP), alpha subunit 32 248 IPR005595 GO:0005789
Lan13g0131 261 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT 11 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0131 Lan-Chr13 767098 770823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0131 K13249 - gmx:100777232 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0131 13 767098 770823 Lan13g0131 13 767098 770823 ECH
Lan7g0071 7 356552 359836 Lan13g0131 13 767098 770823 LSH
Lan8g1870 8 24971298 24974890 Lan13g0131 13 767098 770823 LSH