Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1868 ATGGTTCCACCGGCGGTTCAATCGCCGAACCACCAACAATTCCTAAGCTCCGTCCTCTCCCAGCGCGGCCCCTCCGCCCTCCCCTACTCCGAGGACGCCAAATGGCTGATCCGTCAACACCTGGTTTCTCTGACCACCGCTTTCCCTTCCTTAGAACCCAAAACCGCCACCTTCACCCACAACGACGGCCGCTCCGTCAACCTCCTCCAAGCTGATGGCACCGTCCCTATGCCGTACCAGGGAGTCACCTATAACATCCCCGTTCTCATCTGGCTCATGGAATCATACCCTCGCCACGCTCCTTGCGTCTACGTGAACCCCACGCGCGACATGGTTATTAAGCGCCCACACGCTCACGTTAACCCTTCTGGTCTTGTATCTGTTCCGTATTTGCATAATTGGATCTACCCTAGTTCCAATCTCGTTGATCTTGTTCGCAATTTGAGTCACGCTTTTGCGTCTGATCCTCCTCTTTATTCTCAACGTAGGGCTCCACCACCACCATCACCATCACAATCACCATCACCATCGTCTCATAATAACCCTAACCCCAATTTTGCAAACTCTTCGAATTTGGGTTCTTTTCCATCTGGGTCTTCAAATTTGGGAGCTTTTTCATCTGGGTATTCTCGCCCTTCTGTTCATCCAAATAATTACCCTCCTTCACCTTATGGCTCTGGTTCGGGTTCCGGAAGGGTTCAGCCTTCTCCGTCCCCTCATACTGAGGATCCTACTGAGGTGTTTAAGCGGAACGCGATTAACAAGCTTGTGGAGATGGTGCATGGTGATGTTGTTGGGTTGAGGAAGACAAAGGAGGCTGAAATAGAGGGCTTGTTTAGTATGCAGCCGGTGTTGAAGCAAAGAGAGGATCAGATTAATAAGGGTTTGAAGGAAATGCAGGATGAGATGGAAGGTTTGGAGCAGAAATTGCAGATTATTTTGATGAATAGTGATGTTCTAGAAGGGTGGTTGAGAGATAATCACGGGAAAAAGTTGGGGAGTTTGGAGAATGCAGAGGATGCTTTTGAGTGTGTTGATGCACTTTCTAAGCAGATGCTTGATTGCACTGCTTCTGATTTGGCTACTGAAGATACTTTGTATGCATTGGACAAAGCGGTTCAGGTCGGGAGTGTACCGTTTGATCAGTACCTTAGGAGTGTGCGGGCATTATCAAGAGAGCAATTCTTTCACCGAGCTACTGCTGCGAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATGGCTTCTAGGAATCAACAATATGCTGTCTGA 1278 0.489 MVPPAVQSPNHQQFLSSVLSQRGPSALPYSEDAKWLIRQHLVSLTTAFPSLEPKTATFTHNDGRSVNLLQADGTVPMPYQGVTYNIPVLIWLMESYPRHAPCVYVNPTRDMVIKRPHAHVNPSGLVSVPYLHNWIYPSSNLVDLVRNLSHAFASDPPLYSQRRAPPPPSPSQSPSPSSHNNPNPNFANSSNLGSFPSGSSNLGAFSSGYSRPSVHPNNYPPSPYGSGSGSGRVQPSPSPHTEDPTEVFKRNAINKLVEMVHGDVVGLRKTKEAEIEGLFSMQPVLKQREDQINKGLKEMQDEMEGLEQKLQIILMNSDVLEGWLRDNHGKKLGSLENAEDAFECVDALSKQMLDCTASDLATEDTLYALDKAVQVGSVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMASRNQQYAV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1868 425 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 7 424 - -
Lan8g1868 425 MobiDBLite consensus disorder prediction 206 245 - -
Lan8g1868 425 ProSiteProfiles UEV domain profile. 18 162 IPR008883 GO:0015031|GO:0036211
Lan8g1868 425 MobiDBLite consensus disorder prediction 178 193 - -
Lan8g1868 425 Coils Coil 289 316 - -
Lan8g1868 425 SUPERFAMILY Endosomal sorting complex assembly domain 346 406 IPR037202 -
Lan8g1868 425 ProSiteProfiles Steadiness box (SB) domain profile. 346 414 IPR017916 -
Lan8g1868 425 MobiDBLite consensus disorder prediction 160 177 - -
Lan8g1868 425 PANTHER PROTEIN ELC-LIKE 7 424 - -
Lan8g1868 425 Gene3D - 347 407 - -
Lan8g1868 425 MobiDBLite consensus disorder prediction 156 193 - -
Lan8g1868 425 MobiDBLite consensus disorder prediction 206 241 - -
Lan8g1868 425 Pfam Vps23 core domain 341 403 IPR017916 -
Lan8g1868 425 Pfam UEV domain 38 158 IPR008883 GO:0015031|GO:0036211
Lan8g1868 425 SUPERFAMILY UBC-like 21 158 IPR016135 -
Lan8g1868 425 Gene3D Ubiquitin Conjugating Enzyme 5 160 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1868 Lan-Chr8 24964573 24966436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1868 K12183 - gmx:100778834 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0074 7 365545 367197 Lan8g1868 8 24964573 24966436 LSH