Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0074 ATGCGATTTGGTTGGACTTATATAACAACGATGGTTCCACCGGCGGTTGAATCGCCGAACCCACAACTCACCCAACAATTCCTGAGCTCAGCCCTCTCTCAACGCGGCCCCTCCGCCCTCCCTTATTCCGAAGACACCAAATGGCTCATCCGCCACCACCTCCTCTCTCTCACCACCTCCTTCCCTTCCTTAGAACCCAAAACCGCCACCTTCACCCACAACGACGGCCGCTCCGTCAACCTCCTCCAATCCGATGGCACCGTCCCCATGCCCTACCAGGGCGTCACCTACAACATCCCCGTCGTCATCTGGCTTATGGAATCATACCCTCGCCACCCTCCTTGCGTCTACGTGAACCCCACGCGCGACATGGTTATCAAGCGCCCGCACTCTCACGTTAACCCTTCTGGTTTGGTTTCACTCCCTTATCTCCACAATTGGATCTACCCTAGCTCCAATCTCGTTGATCTTGTTCGCGCCTTGAGTCTCACCTTCGCCGCTGATCCTCCTCTCTTCTCTCAACGCAGGGCCCCACGTACACCCCCTTCTCATAACCCTAACCCTAACCCTAGCCCCAATTTCGATTCTTTTTCATCCGGGTCTTCCAATCCGGGGGCTTTTTCATCTGGGTATTCTCGCCCTTCTATTCCTCCTAATAATTATCCTCCTTCCCCTTATGCTTCTGGTTCTGGAAGGGTTCAGCCTTCGCCGACAACGACGACATCTCATCATGGTGAGGATCAAAGTGAGGTGTTTAAGAGGAATGCAATTAACAAGCTTGTGGAGATAGTGCATGGTGATGTTGTTGGGTTGAGGAAGACAAGGGAGGGCGAAATGGAAGGTTTATTTAGTGTGCAAGGAGTGTTGAAGCAAAGAGAGGATCAGCTTAATAAAGGTTTGAAGGGAATGCGTGATGAGATGGAAGGTTTGGAGCAGCAATTGCAGATGGTTTTGATGAATAGTGATGTTATTGAAGGATGGTTGAGAGATAATCAAGGGAAGAAATTCAGGAGTTTGGAGAATGTGGAAGATGCTTTTGAATGTGTTGATGTGCTTTCTAAGCAGATGCTTGATTGCACTGCTTCTGATTTGGCTATCGAAGATACTCTCTATGCATTGGATAAGGCGGTTCAGGTTGGGAGTGTACCGTTTGATCAGTACTTGAGGAGTGTGAGGGCATTGTCGAGAGAACAGTTCTTTCACCGAGCTATGGTCGCGAAAGTTAGAGCTGCGCAGTTGCAGGCTCAGGTTGCTAATATGGCTTCTAGGAATCAACATTATGCTGTATGA 1290 0.4969 MRFGWTYITTMVPPAVESPNPQLTQQFLSSALSQRGPSALPYSEDTKWLIRHHLLSLTTSFPSLEPKTATFTHNDGRSVNLLQSDGTVPMPYQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMVIKRPHSHVNPSGLVSLPYLHNWIYPSSNLVDLVRALSLTFAADPPLFSQRRAPRTPPSHNPNPNPSPNFDSFSSGSSNPGAFSSGYSRPSIPPNNYPPSPYASGSGRVQPSPTTTTSHHGEDQSEVFKRNAINKLVEIVHGDVVGLRKTREGEMEGLFSVQGVLKQREDQLNKGLKGMRDEMEGLEQQLQMVLMNSDVIEGWLRDNQGKKFRSLENVEDAFECVDVLSKQMLDCTASDLAIEDTLYALDKAVQVGSVPFDQYLRSVRALSREQFFHRAMVAKVRAAQLQAQVANMASRNQHYAV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0074 429 Gene3D Ubiquitin Conjugating Enzyme 14 172 IPR016135 -
Lan7g0074 429 Pfam Vps23 core domain 345 407 IPR017916 -
Lan7g0074 429 PANTHER PROTEIN ELC-LIKE 13 428 - -
Lan7g0074 429 MobiDBLite consensus disorder prediction 172 250 - -
Lan7g0074 429 SUPERFAMILY Endosomal sorting complex assembly domain 350 410 IPR037202 -
Lan7g0074 429 Coils Coil 293 320 - -
Lan7g0074 429 ProSiteProfiles UEV domain profile. 31 175 IPR008883 GO:0015031|GO:0036211
Lan7g0074 429 MobiDBLite consensus disorder prediction 225 245 - -
Lan7g0074 429 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 13 428 - -
Lan7g0074 429 Gene3D - 351 411 - -
Lan7g0074 429 Pfam UEV domain 51 171 IPR008883 GO:0015031|GO:0036211
Lan7g0074 429 MobiDBLite consensus disorder prediction 190 215 - -
Lan7g0074 429 SUPERFAMILY UBC-like 32 171 IPR016135 -
Lan7g0074 429 ProSiteProfiles Steadiness box (SB) domain profile. 350 418 IPR017916 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0074 Lan-Chr7 365545 367197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0074 K12183 - gmx:100798165 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0074 7 365545 367197 Lan8g1868 8 24964573 24966436 LSH