Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1822 ATGGCCATCCAAGCTCAGTTTTATCACAGCAATGGTGGGTCTAATCCATTTTGTGACAATGGATTTTATACTGCTGGCTTTACAGATTCATGTTTCAATCCCCAACAGAGACATCAGCAGCAGATGCAACAATTACAGCAACGTTTGCAACAGCCACACAATGAGAGCCACAACAACCTTGTTGATCCAAATCTTCTTGCTCATAATTCAAAAGCTTTGAATCCTCCTAACTCATTTTCTCAGTTGGAAGAGGTTGATCACTACATCAGATTACAGAATGAGCATCTAAGATTTATGCTACAAGAGCAGGGAAAGCAACAAGTATCAGCATTACTGAATAGAGTGGAATCTCATTCGCTGAAACTCCTGAAGCAAAAAGATGAAGAGATTGCAAAGGCTACAAAGAAAAGGGTAGAGTTGGAAGATTTTATAAAAAGACTAGAGGCAGAGAATCAAGGGTGGCAAAAGATAGCACTGGAAAACGAAGCAATGGCACTATCATTGTGCAGAACATTGGAAGAGATGAAAGAAAAATCATCCTATCATAACAATGTGGCAGATGATGCAGAATCATGGTGTGACGAAAGTAGAAGAGACAAAGAAGAAGCAATAGAGGAAAATAGAATAGGGGTTAAGATGGAACAGATAACGAGGGAGATAATGTTATGTAAAAGCTGTAATTCTAGGAGATCGTGCTTTTTGTTCCTTCCATGTAGGCACCTTTGTTCATGCAAAGCCTGTGATGCTTTTCTTAAGGCTTGCCCTGTTTGCACAATGCCAAAGAAAGCGAGCATAGAAACTTTAATTTAA 810 0.3926 MAIQAQFYHSNGGSNPFCDNGFYTAGFTDSCFNPQQRHQQQMQQLQQRLQQPHNESHNNLVDPNLLAHNSKALNPPNSFSQLEEVDHYIRLQNEHLRFMLQEQGKQQVSALLNRVESHSLKLLKQKDEEIAKATKKRVELEDFIKRLEAENQGWQKIALENEAMALSLCRTLEEMKEKSSYHNNVADDAESWCDESRRDKEEAIEENRIGVKMEQITREIMLCKSCNSRRSCFLFLPCRHLCSCKACDAFLKACPVCTMPKKASIETLI* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1822 269 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 269 IPR017066 -
Lan8g1822 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 268 IPR013083 -
Lan8g1822 269 Coils Coil 123 150 - -
Lan8g1822 269 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 269 - -
Lan8g1822 269 PIRSF SBP1_RNase_bind 19 72 IPR017066 -
Lan8g1822 269 PIRSF SBP1_RNase_bind 32 269 IPR017066 -
Lan8g1822 269 Pfam Zinc finger, C3HC4 type (RING finger) 221 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1822 Lan-Chr8 24676977 24678123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1822 K19042 - gmx:100789863 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0116 7 675750 677181 Lan8g1822 8 24676977 24678123 LSH
Lan8g1822 8 24676977 24678123 Lan13g0185 13 1143621 1144790 LSH