Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0116 ATGGCCATTCAAACTCAGTTTTACCACACCAATGGTGGGTCTAGTCCATTTTGTGACAATGGTTTTTATGCCTCTGGGTTTACAGATTCATGTTTCAATCCCCAACAGATACAACATCTACAGCAGCTACAACAATTACACCAATGTTCCCAACAGTCATATAATGAGAGCCACAACAACCTTGTTGATCCAAATCTTCTTGTTTATAATTCAAAAGCTTTGAATCCTCCTAAATCATTTTTTCAGCTAGAAGACATTGATCAGTACATCAGATTACAGAATGAGAAGTTAAGGTTTGTGCTACAAGAGCTAGTAAAGCAACAAGCATCAGAATTACAGAATAGAGTGGAATCTCATTCGTTAAAACTCCTGAAGCAAAAAGATGAAGAGATTGCAAAGGCTACAAAGAAAAGGGTAGAGTTGGAAGATTTCATAATAAGACTAGAGACAGAGAATCAAGGTTGGGAAAAGATGGCTCAAGAAAACGAAGCAACAGCATTATCCCTATACAAAACATTGGAGGAGATGAAAGAAAAAGCATCCTATAATAACAATGAGATGGTGGTGGCAGATGATGCAGAATCATGGTGTGACGAAAGGAGAAGAGACAAAGAAGAAGGAATAGTAAGAGGAAATAGAACAAGAGTTGAGATGGAACAGATAACAAAGGAAATGATGGTTTGTAAAAGCTGTAATTCTGAGAGGTCGTGCTTTTTGTTCCTTCCATGCAGACACCTTTGTTCATGCAAAACTTGTGATGCATTTCTCAAAGATTGCCCTGTGTGCACAATGCCAAAAAAAGCTAGTATTGAAACTTTAATTTAA 825 0.3721 MAIQTQFYHTNGGSSPFCDNGFYASGFTDSCFNPQQIQHLQQLQQLHQCSQQSYNESHNNLVDPNLLVYNSKALNPPKSFFQLEDIDQYIRLQNEKLRFVLQELVKQQASELQNRVESHSLKLLKQKDEEIAKATKKRVELEDFIIRLETENQGWEKMAQENEATALSLYKTLEEMKEKASYNNNEMVVADDAESWCDERRRDKEEGIVRGNRTRVEMEQITKEMMVCKSCNSERSCFLFLPCRHLCSCKTCDAFLKDCPVCTMPKKASIETLI* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0116 274 Coils Coil 109 151 - -
Lan7g0116 274 PIRSF SBP1_RNase_bind 80 274 IPR017066 -
Lan7g0116 274 PIRSF SBP1_RNase_bind 20 72 IPR017066 -
Lan7g0116 274 Pfam Zinc finger, C3HC4 type (RING finger) 227 266 - -
Lan7g0116 274 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 274 - -
Lan7g0116 274 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 274 IPR017066 -
Lan7g0116 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 273 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0116 Lan-Chr7 675750 677181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0116 176 262 Miscellaneous Gene Families AT2G21380 28.431 9.67e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0116 K19042 - gmx:100789863 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0116 7 675750 677181 Lan8g1822 8 24676977 24678123 LSH
Lan7g0116 7 675750 677181 Lan13g0185 13 1143621 1144790 LSH