Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1821 ATGGCCAAGAAACCTGGATCAAGGCTCAGTAAATTATCTGTATACCTTTACATTCCTAATATCATAGGATACATCCGGATTCTTTTAAACTGTACTGCCTTCTACCTATGTTTTACAAACAAAATATTGTTTTCTATTCTCTATTTTTTCAGCTTTGTATGCGATGCTGTGGATGGCTGGGCTGCTCGCAAATTCAATCAAGTGTCAACCTTTGGGGCTGTTCTGGACATGGTAACAGACAGAATTAGCACCGCTTGTCTACTTGTAGTTCTCTCACAAGTGTACAGGCCTGGCCTGATTTTCTTGTCATTGCTAGCCTTAGATATTGCCAGCCACTGGCTACAAATGTACAGCACTTTCTTGCTGGGAAAGGCTAGTCATAAAGACGTAAAAGACAGCACTAACTGGCTTTTCAAGGCATATTATGGAAATAGGATATTTATGGCTTACTGTTGCGTCTCATGCGAGGTTCTTTATTTAATTTTGTTTTATCTTGCGGAGAATCAAACAGAGAAATTGGTGGATGTTCTGAAAATTAATTTGAAAAGGATATCAATACTTTCTTTCCTCATTGCTACAAGTTTATTTGGATGGGCAATCAAGCAAGTTATAAATATTATTCAGATGAAAACAGCGGCAGATGTGTGTGTTCTTCATGACATTAACAAGAAACACAAGCAGTGA 684 0.3801 MAKKPGSRLSKLSVYLYIPNIIGYIRILLNCTAFYLCFTNKILFSILYFFSFVCDAVDGWAARKFNQVSTFGAVLDMVTDRISTACLLVVLSQVYRPGLIFLSLLALDIASHWLQMYSTFLLGKASHKDVKDSTNWLFKAYYGNRIFMAYCCVSCEVLYLILFYLAENQTEKLVDVLKINLKRISILSFLIATSLFGWAIKQVINIIQMKTAADVCVLHDINKKHKQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1821 227 Coils Coil 218 227 - -
Lan8g1821 227 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 6 226 - -
Lan8g1821 227 PANTHER CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 1 6 226 - -
Lan8g1821 227 Pfam CDP-alcohol phosphatidyltransferase 17 125 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lan8g1821 227 PIRSF CDP_diag_ino_3_P 1 227 IPR014387 -
Lan8g1821 227 Gene3D - 3 170 IPR043130 -
Lan8g1821 227 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1821 Lan-Chr8 24670000 24673949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1821 1 226 Lipid Metabolism Gene Families AT1G68000 75.664 1.05e-131 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1821 K00999 - gmx:100797963 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0117 7 679255 683505 Lan8g1821 8 24670000 24673949 LSH
Lan8g1821 8 24670000 24673949 Lan13g0186 13 1146318 1150822 LSH