Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0186 ATGGCCAAGAAACCTGGACCAAGACCCAGTAAATTATCTGTGTACCTTTACATTCCTAATATCATAGGATACATTCGGGTTCTTTTAAACTGTACTGCCTTCTACCTATGTTTTTCAAACAAAATATTGTTCTCTATTCTCTATTTTTTCAGCTTTGTATGTGATGCTGTGGATGGCTGGGCTGCTCGCAAATTCAATCAAGTGTCAACCTTTGGAGCTGTTCTGGACATGGTAACAGACAGAATTAGCACTGCTTGTCTACTTGTAGTTCTTTCGCAAGTGTACAGGCCTGGCCTGATTTTCTTGTCATTGCTGGCCTTAGATATTGCCAGCCACTGGCTACAAATGTACAGCACTTTCTTGCTGGGAAAGGCTAGTCATAAAGATGTAAAAGACAGCACCAACTGGCTTTTCAAGGCATATTATGGAAATAGGATGTTTATGGCTTACTGCTGTGTCTCATGTGAGGTTCTTTACTTAATCCTGTTTTATCTTGCGGGGAATCAAACAGAGAAATTGGTAGATGTTCTAACAATTAATTTGCAAAAGATATCAATACTTTCTTTCCTCATTGCTACAAGTGTATTTGGATGGGCAATCAAGCAAGTTATAAATATAATTCAGATGAAGACAGCAGCAGATGTGTGTGTGCTTCATGACATTGACAAGAAATACAAGCAGTGA 684 0.3889 MAKKPGPRPSKLSVYLYIPNIIGYIRVLLNCTAFYLCFSNKILFSILYFFSFVCDAVDGWAARKFNQVSTFGAVLDMVTDRISTACLLVVLSQVYRPGLIFLSLLALDIASHWLQMYSTFLLGKASHKDVKDSTNWLFKAYYGNRMFMAYCCVSCEVLYLILFYLAGNQTEKLVDVLTINLQKISILSFLIATSVFGWAIKQVINIIQMKTAADVCVLHDIDKKYKQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0186 227 Gene3D - 10 209 IPR043130 -
Lan13g0186 227 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 3 226 - -
Lan13g0186 227 Pfam CDP-alcohol phosphatidyltransferase 17 143 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lan13g0186 227 PANTHER CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 1 3 226 - -
Lan13g0186 227 PIRSF CDP_diag_ino_3_P 1 227 IPR014387 -
Lan13g0186 227 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0186 Lan-Chr13 1146318 1150822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0186 1 226 Lipid Metabolism Gene Families AT1G68000 76.549 9.52e-134 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0186 K00999 - gmx:100797963 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0186 13 1146318 1150822 Lan13g0186 13 1146318 1150822 ECH
Lan7g0117 7 679255 683505 Lan13g0186 13 1146318 1150822 LSH
Lan8g1821 8 24670000 24673949 Lan13g0186 13 1146318 1150822 LSH