Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1812 ATGGATGCTATCAGAAAACAAGCCTCCAAGCTTCGTGAACAAGTCTCTCGTCAACAACAGGCTGTTTTTAAACAGTTTGGGGGTGGAGTATATGGAGGTTCAGATAATGCGGTTACTAATGAGGTAGAACTCCATCTATATCAGAAACTCGAGAAACTTTACCTATCAACACGTGCTGCAAAGCATTATCAAAGGGATATTGTCCGTGGTGTAGAAGGTTATATCGTTACCGGGTCCAAGCAAGTTGAAATAGGAACAAAGTTGTCAGAAGATAGTAGGAAGTATGGTTCCGAAAATACATGTACCAGCGGCAGTACATTGTCTAGAGCTGCACAAAGTTTTGCACGAGCCCGTGCTCAAATGGAGAAGGAGCGTGGGAACTTACTAAAAGCTCTTGGCACGCAGGTTGCAGAGCCCTTAAGAGCAATGGTGGTGGGAGCTCCATTGGAGGATGCCCGACATCTAGCCCAACGTTATGACCGAATACGACAGGAAGCTGAAGCTCAGGCTACCGAAGTCTTCAAACGTCATGCAAAAGTAAGAGAAACACCAGGCAATGCTGAGAATGCTATGAAATTAGAAGCAGCTGAAACAAAGCTGCAAGACCTGAAGAAAAACACGGCCATGTTAGGGAAAGAAGCGGCTGCAGCTTTGACTGCTGTTGAAGCACAGCAACAGAGGTTAACCCTCCAGCGTCTTATAGCTACGGTTGAAGCGGAGCGTGCCTATCATCAGATAGTCCTACAAATACTTGATCAGCTTGAGGGAGAAATGATATCAGAAAGACAACGAATTGAAGCCCCACCTACGCCTAGTGTTGATAACAGCATGCCACCACCCCCGTCATATGAAGAAGTGAATGGTTTCTATGCTGGTCAGACACATGAAAGATCATCAGATAGCATGGGTTACTTCTTAGGAGAGATTTTATTTCCATACTCTGCTGTGTCTGAAGTGGAGCTGAATCTATCAGTTGGTGATTATGTTGTTGTTCGAAAGGTGACAAATAATGGATGGGCAGAAGGTGAATGCAAAGGGAAAGCAGGTTGGTTTCCATTCAGTTACATTGAAAGAAGGGAGAGGGTTCTTGCAAGCAAGGTGGCTGCGGTGTTTTGA 1116 0.4516 MDAIRKQASKLREQVSRQQQAVFKQFGGGVYGGSDNAVTNEVELHLYQKLEKLYLSTRAAKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGSENTCTSGSTLSRAAQSFARARAQMEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRIRQEAEAQATEVFKRHAKVRETPGNAENAMKLEAAETKLQDLKKNTAMLGKEAAAALTAVEAQQQRLTLQRLIATVEAERAYHQIVLQILDQLEGEMISERQRIEAPPTPSVDNSMPPPPSYEEVNGFYAGQTHERSSDSMGYFLGEILFPYSAVSEVELNLSVGDYVVVRKVTNNGWAEGECKGKAGWFPFSYIERRERVLASKVAAVF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1812 371 ProSiteProfiles Src homology 3 (SH3) domain profile. 302 361 IPR001452 GO:0005515
Lan8g1812 371 Pfam Variant SH3 domain 310 357 IPR001452 GO:0005515
Lan8g1812 371 Coils Coil 1 21 - -
Lan8g1812 371 SUPERFAMILY SH3-domain 265 359 IPR036028 GO:0005515
Lan8g1812 371 Coils Coil 186 213 - -
Lan8g1812 371 SMART SH3_2 305 360 IPR001452 GO:0005515
Lan8g1812 371 Gene3D SH3 Domains 290 368 - -
Lan8g1812 371 Coils Coil 220 240 - -
Lan8g1812 371 Gene3D Arfaptin homology (AH) domain/BAR domain 46 267 IPR027267 -
Lan8g1812 371 PANTHER SH3 DOMAIN-CONTAINING 1 371 - -
Lan8g1812 371 Coils Coil 149 169 - -
Lan8g1812 371 PANTHER PROTEIN, PUTATIVE-RELATED 1 371 - -
Lan8g1812 371 SUPERFAMILY BAR/IMD domain-like 48 258 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1812 Lan-Chr8 24611307 24614734 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1812 - - lang:109325985 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1812 8 24611307 24614734 Lan13g0203 13 1268130 1271728 LSH