Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1803 ATGCTTGTTCTGTTTGAGACACCGGCGGGGTTTGCCCTTTTTAAGGTGCTAAATGAAGGGAAGCTTTCCAAAGTTGAGGATTTAGGGAAGGACTTTTCCACTGCAGATTCTGCCAAACAGATTGTCAAGTTGAAAGCTTTCTCGAAGTTTGAGAATACCTCGGAAGCTTTGGAGGCTGCTACTTTGCTGATTGAAGGGAAAGCTAGCAAAGGTTTGCGCAAGTTCTTGCGTGTTCATTGTGAAAATGAAACACTAGCTGTGGCTGATTCAAAGCTTGGAAATATGATTAAGGAGAAACTGAAAATTGACTGTCTTCACAACAATGCGGTGATGGAGTTGATTAGAGGTGTTAGAAATCATTTAGCTGAACTCATATCTGGTTTAGCTGTACAAGACATGGCCCCAATGAGCTTGGGTTTATCTCATAGTTTATCCAGATTCAAGCTCAAGTTTAGTGCAGATAAGGTGGATACCATGATTGTCCAGGCTATTGGTTTACTTGATGATCTTGATAAAGAATTGAATACATACGCCATGAGGGTTCGGGAGTGGTATGGTTGGCATTTTCCAGAGCTTACTAAAATAATACAGGATAACATCCATTATGCAAAATCAGTTAAGCTGATGGGTGATCGCATTAATGCAGCAGCACTTGATTTCTCTGAGATTTTGCAAGAGGAGGTTGAGGCAGCAGTGAAGGAGGCATCTGTAATATCTATGGGAACTGAAATTGGTGAGCTTGATTTAGCAAATATTAGAGAACTTTGTGATCAAGTCTTGTCTCTCTCAGAGTACAGAGCACAACTCTTTGATTATTTAAAGAGCAGAATGAACACCATTGCACCCAATTTGACTGCCCTTGTTGGGGAACTTGTTGGTGCTCGCCTCATTGCCCATGGAGGTAGCTTAATGAATCTTGCGAAGCAGCCTGGTAGTACTGTGCAGATTCTTGGTGCTGAGAAGGCTCTCTTTAGAGCACTGAAGACGAAGCATGCTACTCCCAAGTATGGTCTTATATATCATGCATCCTTGATTGGCCAGGCAGCCCCAAAGCTCAAGGGTAAGATTTCTCGGTCACTTGCTGCCAAGGCAGCATTGGCTATTAGGTGTGATGCTCTTGGAGAGCCCCAAGATAACTCTTTGGGATTGGAGAGCAGACTCAAGCTTGAAGCACGTTTGAGGAACCTTGAAGGAAAAGAATTAGGTCGTTTTGCTGGTTCTGCCAAAGGGAAACCCAAAATAGAATCATATGACAATGATAGAAAGAAAGGAAGTGGAGGGCTAATTACTCCAGCTAAGACATATAATGCTTCAGCTGATTCAGTTATTGGGCAATTGTCTAAGTCTGCAATTGATGAAGATACACCAGAGCTAGCTATCACTGATAAAAAGAAAGAGAAGAAAGAGAAGAAAGAAAAGAAAAAAAAGGAAGAGAAGAATGAGGAGGATGCAACATTGCAACCTGATGGTGATGCTGGTGAAGAACCAGAACATGATGTTGTGAAGAAGGAAAAGAAGAAAAAGAAGAATTCTGCCGACGATGACGACAATTTGGATGCGGGAGAAAAGAAGAAAAAGAGGAAAAAGCATGCAGACCAGGAAGAATCACCTGAACTGCCAATCAAAAAGAAAGGGAAAACGAAGAAAAATGATAGTTAG 1659 0.4177 MLVLFETPAGFALFKVLNEGKLSKVEDLGKDFSTADSAKQIVKLKAFSKFENTSEALEAATLLIEGKASKGLRKFLRVHCENETLAVADSKLGNMIKEKLKIDCLHNNAVMELIRGVRNHLAELISGLAVQDMAPMSLGLSHSLSRFKLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIHYAKSVKLMGDRINAAALDFSEILQEEVEAAVKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLFDYLKSRMNTIAPNLTALVGELVGARLIAHGGSLMNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKLKGKISRSLAAKAALAIRCDALGEPQDNSLGLESRLKLEARLRNLEGKELGRFAGSAKGKPKIESYDNDRKKGSGGLITPAKTYNASADSVIGQLSKSAIDEDTPELAITDKKKEKKEKKEKKKKEEKNEEDATLQPDGDAGEEPEHDVVKKEKKKKKNSADDDDNLDAGEKKKKRKKHADQEESPELPIKKKGKTKKNDS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1803 552 Gene3D - 129 284 - -
Lan8g1803 552 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Lan8g1803 552 SMART NOSIC_2 159 211 IPR012976 -
Lan8g1803 552 Coils Coil 460 487 - -
Lan8g1803 552 SUPERFAMILY Nop domain 153 397 IPR036070 -
Lan8g1803 552 MobiDBLite consensus disorder prediction 462 552 - -
Lan8g1803 552 MobiDBLite consensus disorder prediction 407 432 - -
Lan8g1803 552 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Lan8g1803 552 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Lan8g1803 552 Gene3D Nop domain 285 397 IPR042239 -
Lan8g1803 552 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 550 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lan8g1803 552 PANTHER PROTEIN NOP56, PUTATIVE-RELATED 1 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1803 Lan-Chr8 24565637 24569343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1803 K14565 - gmx:100775301 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0140 7 843289 847052 Lan8g1803 8 24565637 24569343 LSH
Lan8g1803 8 24565637 24569343 Lan13g0214 13 1341316 1345203 LSH